Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D18
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   3.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   6.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.8  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   9.0  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              20   9.0  

>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 153 NEYSTPANDPKN 188
           N  ST +NDPKN
Sbjct: 102 NRSSTSSNDPKN 113


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 117 EQPTDTVAIPTENEYSTPANDP 182
           E+PT+T +   E+E  TP  DP
Sbjct: 425 EEPTNTASGSNEDEDETPL-DP 445


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 252 YFEIYLAYFVEVTAHIGSPPAYSL 181
           YF I   + +E+   I  PPA  L
Sbjct: 29  YFRISRRHLLELAEKIPGPPALPL 52


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 186 NMQEVTQYVQSLLQSMQDK 242
           N Q+ TQY+     ++Q+K
Sbjct: 391 NTQQFTQYIPESSSNLQEK 409


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 95  NYTYPVTVTKQRYSIILIF 39
           NY+   T++   YS++L++
Sbjct: 188 NYSASTTLSHAEYSMLLVY 206


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 9  FAYCLCIGLL 38
          F +C+C+G L
Sbjct: 8  FGFCVCVGAL 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,004
Number of Sequences: 438
Number of extensions: 2111
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)