Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D17
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 118 3e-27
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 95 5e-20
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 95 5e-20
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 95 5e-20
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 95 5e-20
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 95 5e-20
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 95 5e-20
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 92 3e-19
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 92 3e-19
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 91 4e-19
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 89 3e-18
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 89 3e-18
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 89 3e-18
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 87 7e-18
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 81 8e-16
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 81 8e-16
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 79 2e-15
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 79 2e-15
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 79 2e-15
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 77 1e-14
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 77 1e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 76 2e-14
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 74 7e-14
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 74 7e-14
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 73 1e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 69 3e-12
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 68 4e-12
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 68 4e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 64 6e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 64 6e-11
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 64 1e-10
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 61 5e-10
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 61 7e-10
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 58 4e-09
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 57 8e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 56 3e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 53 2e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 53 2e-07
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 52 4e-07
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 50 1e-06
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 50 1e-06
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 49 3e-06
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 48 4e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 48 4e-06
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 46 2e-05
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 45 4e-05
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 44 6e-05
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 44 6e-05
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 44 6e-05
CU457741-15|CAM36357.1| 110|Caenorhabditis elegans Hypothetical... 43 1e-04
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 40 0.002
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.21
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 29 1.9
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 1.9
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 29 1.9
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 29 1.9
AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical ... 29 2.5
U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical pr... 29 3.3
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical ... 28 5.9
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 118 bits (284), Expect = 3e-27
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HGGKDQ +R +EAFR+ EKDVLVATDVASKGLDF I+HVIN+DMPEDIENYVHRIGR
Sbjct: 472 HGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGR 531
Query: 587 TGRAG 601
TGR+G
Sbjct: 532 TGRSG 536
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 94.7 bits (225), Expect = 5e-20
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRIGR
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 696
Query: 587 TGRAG 601
TGR G
Sbjct: 697 TGRVG 701
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 94.7 bits (225), Expect = 5e-20
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRIGR
Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 907
Query: 587 TGRAG 601
TGR G
Sbjct: 908 TGRVG 912
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 94.7 bits (225), Expect = 5e-20
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRIGR
Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 907
Query: 587 TGRAG 601
TGR G
Sbjct: 908 TGRVG 912
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 94.7 bits (225), Expect = 5e-20
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRIGR
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 696
Query: 587 TGRAG 601
TGR G
Sbjct: 697 TGRVG 701
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 94.7 bits (225), Expect = 5e-20
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRIGR
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 696
Query: 587 TGRAG 601
TGR G
Sbjct: 697 TGRVG 701
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 94.7 bits (225), Expect = 5e-20
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q ERS A+ FR G K VL+AT VA +GLD + HVINYDMP++I++Y+HRIGR
Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGR 907
Query: 587 TGRAG 601
TGR G
Sbjct: 908 TGRVG 912
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 91.9 bits (218), Expect = 3e-19
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q+ERS A++ FR G K VL+AT V +GLD + HVINYDMP +I++Y+HRIGR
Sbjct: 594 HGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGR 653
Query: 587 TGRAG 601
TGR G
Sbjct: 654 TGRVG 658
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 91.9 bits (218), Expect = 3e-19
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG ++Q+ERS A++ FR G K VL+AT V +GLD + HVINYDMP +I++Y+HRIGR
Sbjct: 594 HGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGR 653
Query: 587 TGRAG 601
TGR G
Sbjct: 654 TGRVG 658
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 91.5 bits (217), Expect = 4e-19
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HGG+ Q +R ++ R GE +LVATD+AS+G+D +I HV+NYD P DIE YVHR+GR
Sbjct: 369 HGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGR 428
Query: 587 TGRAG 601
TGRAG
Sbjct: 429 TGRAG 433
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 88.6 bits (210), Expect = 3e-18
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HGGK Q++R A++A + G D+LVATDVA +G+D ++ V+NYDM + IE+Y HRIGR
Sbjct: 604 HGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGR 663
Query: 587 TGRAG 601
TGRAG
Sbjct: 664 TGRAG 668
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 NSRLVLSLS-HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 556
N + + S+S HG Q ER R +E FR G+ +LVAT VA++GLD N++HVINYD+P D
Sbjct: 419 NRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGD 478
Query: 557 IENYVHRIGRTGRAG 601
+ YVHRIGRTGR G
Sbjct: 479 SDEYVHRIGRTGRCG 493
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 NSRLVLSLS-HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 556
N + + S+S HG Q ER R +E FR G+ +LVAT VA++GLD N++HVINYD+P D
Sbjct: 403 NRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGD 462
Query: 557 IENYVHRIGRTGRAG 601
+ YVHRIGRTGR G
Sbjct: 463 SDEYVHRIGRTGRCG 477
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/75 (56%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +2
Query: 380 NSRLVLSLS-HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPED 556
N + + S+S HG Q ER R +E FR G+ +LVAT VA++GLD N++HVINYD+P D
Sbjct: 400 NRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGD 459
Query: 557 IENYVHRIGRTGRAG 601
+ YVHRIGRTGR G
Sbjct: 460 SDEYVHRIGRTGRCG 474
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 87.4 bits (207), Expect = 7e-18
Identities = 37/65 (56%), Positives = 48/65 (73%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG Q ER + ++ FR G +LVAT VA++GLD N++HVINYD+P D++ YVHRIGR
Sbjct: 458 HGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGR 517
Query: 587 TGRAG 601
TGR G
Sbjct: 518 TGRVG 522
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/74 (48%), Positives = 51/74 (68%)
Frame = +2
Query: 380 NSRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 559
+S L + + GK +ER +E FRRGE VLV T++ +GLD +++ VINYD+P I
Sbjct: 397 DSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSI 456
Query: 560 ENYVHRIGRTGRAG 601
+Y+HR+GRTGRAG
Sbjct: 457 VSYIHRVGRTGRAG 470
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HGG DQ +R ++ F+ G VLVAT VA++GLD N+ V+NYD P E+YVHR+GR
Sbjct: 583 HGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGR 642
Query: 587 TGRAG 601
TGRAG
Sbjct: 643 TGRAG 647
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG K+Q ER ++ F+ G+ +++ATDVA++GLD +I+ VINYD P + E+YVHRIGR
Sbjct: 407 HGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGR 466
Query: 587 TGRA 598
TGR+
Sbjct: 467 TGRS 470
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 383 SRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 562
++ +S HG DQ ER + FR G VL+ TD+ ++G+D + VINYD+P + E
Sbjct: 291 NQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRE 350
Query: 563 NYVHRIGRTGRAG 601
NY+HRIGR+GR G
Sbjct: 351 NYIHRIGRSGRFG 363
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 383 SRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 562
++ +S HG DQ ER + FR G VL+ TD+ ++G+D + VINYD+P + E
Sbjct: 4 NQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRE 63
Query: 563 NYVHRIGRTGRAG 601
NY+HRIGR+GR G
Sbjct: 64 NYIHRIGRSGRFG 76
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 383 SRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 562
++ +S HG DQ ER + FR G VL+ TD+ ++G+D + VINYD+P + E
Sbjct: 291 NQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRE 350
Query: 563 NYVHRIGRTGRAG 601
NY+HRIGR+GR G
Sbjct: 351 NYIHRIGRSGRFG 363
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPE--DIENYVHRI 580
H ++QE+R R ++ FRRG+ +VA++V ++GL+ A + HV+NYDMP+ + YV+RI
Sbjct: 1033 HSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRI 1092
Query: 581 GRTGRAG 601
GRTGRAG
Sbjct: 1093 GRTGRAG 1099
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPE--DIENYVHRI 580
H ++QE+R R ++ FRRG+ +VA++V ++GL+ A + HV+NYDMP+ + YV+RI
Sbjct: 1033 HSYQNQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRI 1092
Query: 581 GRTGRAG 601
GRTGRAG
Sbjct: 1093 GRTGRAG 1099
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = +2
Query: 401 LSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRI 580
L HG Q ER+ + FR+ + +LVATDVA++GLD + I+ VIN+DM DI+ +VHRI
Sbjct: 540 LLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRI 598
Query: 581 GRTGRAG 601
GRTGRAG
Sbjct: 599 GRTGRAG 605
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG QE+R ++ F+ +++LV TDVA++GLD ++ VINYDMP ++YVHR+GR
Sbjct: 314 HGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGR 373
Query: 587 TGRAG 601
T RAG
Sbjct: 374 TARAG 378
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 74.1 bits (174), Expect = 7e-14
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +2
Query: 383 SRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 562
+ +S HG +Q++R ++ FR G VL++TDV ++GLD + VINYD+P + E
Sbjct: 288 ANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRE 347
Query: 563 NYVHRIGRTGRAG 601
Y+HRIGR+GR G
Sbjct: 348 LYIHRIGRSGRFG 360
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 74.1 bits (174), Expect = 7e-14
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +2
Query: 383 SRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIE 562
+ +S HG +Q++R ++ FR G VL++TDV ++GLD + VINYD+P + E
Sbjct: 288 ANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRE 347
Query: 563 NYVHRIGRTGRAG 601
Y+HRIGR+GR G
Sbjct: 348 LYIHRIGRSGRFG 360
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 73.3 bits (172), Expect = 1e-13
Identities = 31/60 (51%), Positives = 45/60 (75%)
Frame = +2
Query: 422 QEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRAG 601
Q +R ++ F++ E DVLV+TD+AS+GLD +Q VIN +MP+ I+ Y+HR+GRT RAG
Sbjct: 453 QGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAG 512
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H QEER +AF+ +K +LVATD+ +G+D + V NYDMPED ++Y+HR+ R
Sbjct: 314 HRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVAR 373
Query: 587 TGRAG 601
GR G
Sbjct: 374 AGRFG 378
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 68.9 bits (161), Expect = 3e-12
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H QEER +AF+ +K +LVATD+ +G+D + V NYDMPED ++Y+HR+ R
Sbjct: 306 HRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVAR 365
Query: 587 TGRAG 601
GR G
Sbjct: 366 AGRFG 370
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H Q++R + +E F + VL+ATDVA++GLD I HVI+Y +P+ +E Y+HR GR
Sbjct: 304 HAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGR 363
Query: 587 TGRA 598
T RA
Sbjct: 364 TARA 367
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H Q++R + +E F + VL+ATDVA++GLD I HVI+Y +P+ +E Y+HR GR
Sbjct: 471 HAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGR 530
Query: 587 TGRA 598
T RA
Sbjct: 531 TARA 534
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H Q++R A+ AFR V++ TDVAS+GLD ++ V+N+++P+ + Y+HR+GR
Sbjct: 368 HSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGR 427
Query: 587 TGRAG 601
+ RAG
Sbjct: 428 SARAG 432
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 64.5 bits (150), Expect = 6e-11
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H Q++R A+ AFR V++ TDVAS+GLD ++ V+N+++P+ + Y+HR+GR
Sbjct: 368 HSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGR 427
Query: 587 TGRAG 601
+ RAG
Sbjct: 428 SARAG 432
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG + EER ++E F++G LV +DV ++GLD + VI+ +P++ YVHRIGR
Sbjct: 536 HGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMYVHRIGR 595
Query: 587 TGRA 598
GRA
Sbjct: 596 VGRA 599
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 410 GGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRT 589
G +Q++R F + VL+ATDVAS+GLDF +I VI D P I++Y+HR+GR+
Sbjct: 354 GTMNQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRS 413
Query: 590 GR 595
R
Sbjct: 414 AR 415
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 61.3 bits (142), Expect = 5e-10
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMP-----EDIENYV 571
HG + Q+ R + + F+ ++LV TD+ S+G+D +++ VIN+D+P + + ++
Sbjct: 677 HGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFI 736
Query: 572 HRIGRTGRAG 601
HR GRTGR G
Sbjct: 737 HRAGRTGRTG 746
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 61.3 bits (142), Expect = 5e-10
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H Q R+R FR+G LV +D+ ++G+D + VIN+D P + E Y+HRIGR
Sbjct: 311 HSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGR 370
Query: 587 TGRAG 601
+GR G
Sbjct: 371 SGRFG 375
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 60.9 bits (141), Expect = 7e-10
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +2
Query: 425 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRAG 601
+ R + +E F + E VL+ +DV ++G D + VINY++P D + +VHR GRTGRAG
Sbjct: 436 KRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAG 494
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 58.4 bits (135), Expect = 4e-09
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG + Q++R+ F + E +L+ TDVA++GLD + ++ YD ++ Y+HR+GR
Sbjct: 345 HGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGR 404
Query: 587 TGR 595
T R
Sbjct: 405 TAR 407
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
HG R+ ++AF V+++TDV ++G+D ++I VI +D+P+ +VHR GR
Sbjct: 290 HGKCSNPHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGR 349
Query: 587 TGRAG 601
T R G
Sbjct: 350 TARCG 354
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMP------------ 550
HG ER+ + F+RG+ VL+ T+V ++G+D A + VINYD+P
Sbjct: 486 HGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVV 545
Query: 551 -----EDIENYVHRIGRTGRAG 601
D E Y+HRIGRTGR G
Sbjct: 546 DGFTQPDCETYLHRIGRTGRFG 567
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMP------------ 550
HG ER+ + F+RG+ VL+ T+V ++G+D A + VINYD+P
Sbjct: 511 HGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVV 570
Query: 551 -----EDIENYVHRIGRTGRAG 601
D E Y+HRIGRTGR G
Sbjct: 571 DGFTQPDCETYLHRIGRTGRFG 592
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 17/82 (20%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMP------------ 550
HG ER+ + F+RG+ VL+ T+V ++G+D A + VINYD+P
Sbjct: 895 HGDMTVVERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVV 954
Query: 551 -----EDIENYVHRIGRTGRAG 601
D E Y+HRIGRTGR G
Sbjct: 955 DGFTQPDCETYLHRIGRTGRFG 976
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +2
Query: 380 NSRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 559
+S L ++ Q++R AV+ R +LV++D+ ++G+D N+ V+N D +
Sbjct: 281 SSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANE 340
Query: 560 ENYVHRIGRTGRAG 601
E Y HRIGR R G
Sbjct: 341 ETYFHRIGRAARFG 354
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +2
Query: 380 NSRLVLSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDI 559
+S L ++ Q++R AV+ R +LV++D+ ++G+D N+ V+N D +
Sbjct: 281 SSGLDVTFVSSAMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANE 340
Query: 560 ENYVHRIGRTGRAG 601
E Y HRIGR R G
Sbjct: 341 ETYFHRIGRAARFG 354
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 419 DQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRA 598
D R ++ F + ++LV TDVA++G+D + VIN P + +VHR+GR RA
Sbjct: 300 DATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARA 359
Query: 599 G 601
G
Sbjct: 360 G 360
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/61 (37%), Positives = 35/61 (57%)
Frame = +2
Query: 419 DQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRA 598
D R ++ F + ++LV TDVA++G+D + VIN P + +VHR+GR RA
Sbjct: 300 DATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARA 359
Query: 599 G 601
G
Sbjct: 360 G 360
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H G + +R +A F R + +VAT G+D ++++VI+Y P +IE+Y IGR
Sbjct: 477 HAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGR 536
Query: 587 TGRAG 601
GR G
Sbjct: 537 AGRDG 541
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H + +RS A + + G+ V+VAT G+D N++ VI++ +P+ IENY GR
Sbjct: 340 HAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGR 399
Query: 587 TGRAG 601
GR G
Sbjct: 400 AGRDG 404
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H + +RS A + + G+ V+VAT G+D N++ VI++ +P+ IENY GR
Sbjct: 363 HAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGR 422
Query: 587 TGRAG 601
GR G
Sbjct: 423 AGRDG 427
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 395 LSLSHGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVH 574
+S HG + ER V+ F VLV TD+ ++G++ +INYD+ ++ENY+
Sbjct: 254 VSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENYML 312
Query: 575 RIGRTGRAG 601
R GR G G
Sbjct: 313 RNGRQGNFG 321
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 413 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTG 592
GK E+ + + ++ K L S+G+DF ++ +V+N+D PE + Y+HR+GRT
Sbjct: 343 GKSDEKPEKDEKKGKKASK--LDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTA 400
Query: 593 R 595
R
Sbjct: 401 R 401
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +2
Query: 413 GKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTG 592
GK E+ + + ++ K L S+G+DF ++ +V+N+D PE + Y+HR+GRT
Sbjct: 410 GKSDEKPEKDEKKGKKASK--LDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTA 467
Query: 593 R 595
R
Sbjct: 468 R 468
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2
Query: 476 LVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRAG 601
+V T++ ++G+D ++++H I +M D + Y HRIGR GR G
Sbjct: 430 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGRDG 471
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 425 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRAG 601
+ ++ + F R E + L+AT V +G+D VI +D P D+ +YV GR RAG
Sbjct: 440 KRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRAG 498
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H G + R ++ + DV+ AT G+D +++ VI+Y +P+ IE Y GR
Sbjct: 500 HAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGR 559
Query: 587 TGRAG 601
GR G
Sbjct: 560 AGRDG 564
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H G + R ++ + DV+ AT G+D +++ VI+Y +P+ IE Y GR
Sbjct: 500 HAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGR 559
Query: 587 TGRAG 601
GR G
Sbjct: 560 AGRDG 564
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +2
Query: 476 LVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRAG 601
+V T++ S+G+D ++++ I +M D +Y+HRIGR GR G
Sbjct: 428 VVCTNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGRDG 469
>CU457741-15|CAM36357.1| 110|Caenorhabditis elegans Hypothetical
protein C42C1.14 protein.
Length = 110
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = +1
Query: 112 LRGIQPARPQSVLGLWLTRKEGPVQAPFMAGVLCHKCVKQRIVRAFLIEEQKIV 273
L GI PARP ++ L R E V + G L VK+RI RAFL+EEQKIV
Sbjct: 51 LHGITPARPIALR--LLKRNERTVTRAY-GGCLSPNAVKERITRAFLVEEQKIV 101
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 41.5 bits (93), Expect = 4e-04
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +2
Query: 476 LVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGRTGRAG 601
+V T++ ++G+D ++++H I +M D + Y HRIGR +G
Sbjct: 277 VVCTNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVSISG 318
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDMPEDIENYVHRIGR 586
H G +++R+ E + E V+ AT G+D +++ VI++ +++ Y GR
Sbjct: 445 HAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQNLAGYYQEAGR 504
Query: 587 TGRAG 601
GR G
Sbjct: 505 AGRDG 509
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.21
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = -3
Query: 599 PRDPSSLSGARSSRYPPACRS*SRAGCSQSPDLY*RRQWRPARPSPRAGKPPRRETSPPG 420
P P SGA S PP S+SP + QW RP P P PPG
Sbjct: 511 PPGPFDPSGAPPSGMPPVPLPTDLPIPSESPSFF---QWIFGRPKPSGPAGPAPSGEPPG 567
Query: 419 PY 414
P+
Sbjct: 568 PF 569
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 425 EERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYD 544
+E+ ++ F G V+VAT V +GLD +I Y+
Sbjct: 814 QEQQLTLDKFNNGRLKVIVATSVVEEGLDVTACNLIIKYN 853
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = -3
Query: 554 PPACRS*SRAGCSQSPDLY*RRQWRPARPSPRAGKPPRRETSPPGPYRR 408
PP R SRAG S P R P P PR+ P R +PP P RR
Sbjct: 125 PPPPRK-SRAGGSSPPPPPPPRV--PRTPPPRSPPPRRPPMTPPSPQRR 170
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = -3
Query: 578 SGARSSRYPPACRS*SRAGCSQSPDLY*RRQWRPAR--------PSPRAGKPPRRETSPP 423
S AR PP S R S D R+ R +R P PR PR+ +SP
Sbjct: 222 SAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPS 281
Query: 422 GPYRRVRERE 393
P + R+RE
Sbjct: 282 APAKNDRKRE 291
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = -3
Query: 578 SGARSSRYPPACRS*SRAGCSQSPDLY*RRQWRPAR--------PSPRAGKPPRRETSPP 423
S AR PP S R S D R+ R +R P PR PR+ +SP
Sbjct: 222 SAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPS 281
Query: 422 GPYRRVRERE 393
P + R+RE
Sbjct: 282 APAKNDRKRE 291
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -3
Query: 482 RPARPSPRAGKPPRRETSPPGPYRRVR 402
RP RPSP PPRR P P RR R
Sbjct: 83 RPMRPSP---SPPRRRRPSPSPPRRDR 106
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = -3
Query: 578 SGARSSRYPPACRS*SRAGCSQSPDLY*RRQWRPAR--------PSPRAGKPPRRETSPP 423
S AR PP S R S D R+ R +R P PR PR+ +SP
Sbjct: 222 SAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPS 281
Query: 422 GPYRRVRERE 393
P + R+RE
Sbjct: 282 APAKNDRKRE 291
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = -3
Query: 578 SGARSSRYPPACRS*SRAGCSQSPDLY*RRQWRPAR--------PSPRAGKPPRRETSPP 423
S AR PP S R S D R+ R +R P PR PR+ +SP
Sbjct: 222 SAARRHSPPPRRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAASPRKASSPS 281
Query: 422 GPYRRVRERE 393
P + R+RE
Sbjct: 282 APAKNDRKRE 291
>AC024819-4|AAU20828.1| 469|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3b protein.
Length = 469
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDM--PEDI--ENYVH 574
H G Q+ER AF G V+ AT + G++ + +I M E + Y+
Sbjct: 17 HSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQ 76
Query: 575 RIGRTGRAG 601
GR GRAG
Sbjct: 77 MAGRAGRAG 85
>AC024819-3|AAF59587.2| 923|Caenorhabditis elegans Hypothetical
protein Y55B1AL.3a protein.
Length = 923
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDM--PEDI--ENYVH 574
H G Q+ER AF G V+ AT + G++ + +I M E + Y+
Sbjct: 471 HSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQ 530
Query: 575 RIGRTGRAG 601
GR GRAG
Sbjct: 531 MAGRAGRAG 539
>U97005-9|AAK72085.1| 829|Caenorhabditis elegans Hypothetical
protein F19F10.9 protein.
Length = 829
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRR 460
HGG D EE R +EAFRR
Sbjct: 296 HGGVDLEEERREMEAFRR 313
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
protein W03A3.2 protein.
Length = 1540
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +2
Query: 407 HGGKDQEERSRAVEAFRRGEKDVLVATDVASKGLDFANIQHVINYDM--PEDIE--NYVH 574
H G EER FR +LVAT + G++ + +I P + NY
Sbjct: 206 HAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKAQPRGPSALTSLNYRQ 265
Query: 575 RIGRTGRAG 601
+GR GR G
Sbjct: 266 MVGRAGRTG 274
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 465 SPRRKASTARDLSSWSLPPC 406
SP RK TA+D + W +PPC
Sbjct: 235 SPPRKM-TAKDQNDWKIPPC 253
>AF039044-7|AAG24125.1| 125|Caenorhabditis elegans Hypothetical
protein F48G7.9 protein.
Length = 125
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 537 LITCWMFAKSRPLLATSVATSTSFSPRRKASTARDLSSWSLPPCERERTSL 385
+ITC ++ SR SV+TST P + +S ++ S E E+ L
Sbjct: 72 MITCCVYDSSRRSSLASVSTSTKNWPSKSSSAPSSPTAGSTAKKEYEKVKL 122
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -3
Query: 494 RRQWRPARPSPRAGKPPRRETSPPGPYRR 408
RR+ P R SPR G PRR+T P RR
Sbjct: 212 RRRSPPRRGSPRRGS-PRRDTRRSPPRRR 239
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 488 QWRPARPSPRAGKPPRRETSP 426
+W+P P P GKPP SP
Sbjct: 196 EWKPPPPPPMPGKPPIVPQSP 216
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 488 QWRPARPSPRAGKPPRRETSP 426
+W+P P P GKPP SP
Sbjct: 196 EWKPPPPPPMPGKPPIVPQSP 216
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -3
Query: 494 RRQWRPARPSPRAGKPPRRET--SPPGP 417
R + R RP P G PP R PPGP
Sbjct: 80 RERCRNRRPQPTPGPPPPRNNCLPPPGP 107
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -3
Query: 494 RRQWRPARPSPRAGKPPRRET--SPPGP 417
R + R RP P G PP R PPGP
Sbjct: 80 RERCRNRRPQPTPGPPPPRNNCLPPPGP 107
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -3
Query: 494 RRQWRPARPSPRAGKPPRRET--SPPGP 417
R + R RP P G PP R PPGP
Sbjct: 80 RERCRNRRPQPTPGPPPPRNNCLPPPGP 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,446
Number of Sequences: 27780
Number of extensions: 239027
Number of successful extensions: 871
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -