Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D15
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC033094-1|AAH33094.1| 1332|Homo sapiens inhibitor of kappa ligh... 101 7e-22
AL359692-2|CAI40569.1| 1332|Homo sapiens inhibitor of kappa ligh... 101 7e-22
AL354797-1|CAI39465.1| 1332|Homo sapiens inhibitor of kappa ligh... 101 7e-22
AF153419-1|AAG43369.1| 1332|Homo sapiens IkappaBkinase complex-a... 101 7e-22
AF044195-1|AAC64258.1| 1332|Homo sapiens IkappaB kinase complex ... 101 7e-22
AB210033-1|BAE06115.1| 1342|Homo sapiens IKBKAP variant protein ... 101 7e-22
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 32 0.61
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 32 0.61
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 32 0.61
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 32 0.61
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 32 0.61
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 32 0.61
BC131735-1|AAI31736.1| 2371|Homo sapiens neuroblastoma-amplified... 29 7.5
BC051792-1|AAH51792.2| 1418|Homo sapiens NAG protein protein. 29 7.5
AL591042-2|CAI14458.1| 753|Homo sapiens vav 3 oncogene protein. 29 7.5
AL591042-1|CAI14457.1| 847|Homo sapiens vav 3 oncogene protein. 29 7.5
AL513206-2|CAH73196.1| 753|Homo sapiens vav 3 oncogene protein. 29 7.5
AL513206-1|CAH73195.1| 847|Homo sapiens vav 3 oncogene protein. 29 7.5
AL391235-1|CAH72458.1| 847|Homo sapiens vav 3 oncogene protein. 29 7.5
AL353892-1|CAI21786.1| 847|Homo sapiens vav 3 oncogene protein. 29 7.5
AL050281-1|CAB43382.1| 1296|Homo sapiens hypothetical protein pr... 29 7.5
AF388385-1|AAM93544.1| 2371|Homo sapiens neuroblastoma-amplified... 29 7.5
AF118887-1|AAD20349.1| 847|Homo sapiens VAV-3 protein protein. 29 7.5
AF118886-1|AAD20348.1| 753|Homo sapiens VAV-3 protein beta isof... 29 7.5
AF067817-1|AAC79695.1| 847|Homo sapiens VAV-3 protein protein. 29 7.5
AC008282-1|AAY24347.1| 1060|Homo sapiens unknown protein. 29 7.5
>BC033094-1|AAH33094.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 101 bits (243), Expect = 7e-22
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 37 LYTTGNYHWYLKQTLLFNS--DQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYSWIWNI 210
L+T GNYHWYLKQ+L F++ KI+ LMWD +LHVL Y Y W W
Sbjct: 322 LWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDP----VTPYRLHVLCQGWHYLAYDWHWTT 377
Query: 211 NHSKGKSINDDAVVVVIDGKKILVSSFKQTVVPPPMSSFETELDTYINSVCFAPH 375
+ S G + +D + V VIDG ++LV+ F+QTVVPPPM +++ +N V F H
Sbjct: 378 DRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAH 432
>AL359692-2|CAI40569.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 101 bits (243), Expect = 7e-22
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 37 LYTTGNYHWYLKQTLLFNS--DQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYSWIWNI 210
L+T GNYHWYLKQ+L F++ KI+ LMWD +LHVL Y Y W W
Sbjct: 322 LWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDP----VTPYRLHVLCQGWHYLAYDWHWTT 377
Query: 211 NHSKGKSINDDAVVVVIDGKKILVSSFKQTVVPPPMSSFETELDTYINSVCFAPH 375
+ S G + +D + V VIDG ++LV+ F+QTVVPPPM +++ +N V F H
Sbjct: 378 DRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAH 432
>AL354797-1|CAI39465.1| 1332|Homo sapiens inhibitor of kappa light
polypeptide gene enhancer in B-cells, kinase complex-a
protein.
Length = 1332
Score = 101 bits (243), Expect = 7e-22
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 37 LYTTGNYHWYLKQTLLFNS--DQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYSWIWNI 210
L+T GNYHWYLKQ+L F++ KI+ LMWD +LHVL Y Y W W
Sbjct: 322 LWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDP----VTPYRLHVLCQGWHYLAYDWHWTT 377
Query: 211 NHSKGKSINDDAVVVVIDGKKILVSSFKQTVVPPPMSSFETELDTYINSVCFAPH 375
+ S G + +D + V VIDG ++LV+ F+QTVVPPPM +++ +N V F H
Sbjct: 378 DRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAH 432
>AF153419-1|AAG43369.1| 1332|Homo sapiens IkappaBkinase
complex-associated protein protein.
Length = 1332
Score = 101 bits (243), Expect = 7e-22
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 37 LYTTGNYHWYLKQTLLFNS--DQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYSWIWNI 210
L+T GNYHWYLKQ+L F++ KI+ LMWD +LHVL Y Y W W
Sbjct: 322 LWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDP----VTPYRLHVLCQGWHYLAYDWHWTT 377
Query: 211 NHSKGKSINDDAVVVVIDGKKILVSSFKQTVVPPPMSSFETELDTYINSVCFAPH 375
+ S G + +D + V VIDG ++LV+ F+QTVVPPPM +++ +N V F H
Sbjct: 378 DRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAH 432
>AF044195-1|AAC64258.1| 1332|Homo sapiens IkappaB kinase complex
associated protein protein.
Length = 1332
Score = 101 bits (243), Expect = 7e-22
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 37 LYTTGNYHWYLKQTLLFNS--DQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYSWIWNI 210
L+T GNYHWYLKQ+L F++ KI+ LMWD +LHVL Y Y W W
Sbjct: 322 LWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDP----VTPYRLHVLCQGWHYLAYDWHWTT 377
Query: 211 NHSKGKSINDDAVVVVIDGKKILVSSFKQTVVPPPMSSFETELDTYINSVCFAPH 375
+ S G + +D + V VIDG ++LV+ F+QTVVPPPM +++ +N V F H
Sbjct: 378 DRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAH 432
>AB210033-1|BAE06115.1| 1342|Homo sapiens IKBKAP variant protein
protein.
Length = 1342
Score = 101 bits (243), Expect = 7e-22
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Frame = +1
Query: 37 LYTTGNYHWYLKQTLLFNS--DQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYSWIWNI 210
L+T GNYHWYLKQ+L F++ KI+ LMWD +LHVL Y Y W W
Sbjct: 332 LWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDP----VTPYRLHVLCQGWHYLAYDWHWTT 387
Query: 211 NHSKGKSINDDAVVVVIDGKKILVSSFKQTVVPPPMSSFETELDTYINSVCFAPH 375
+ S G + +D + V VIDG ++LV+ F+QTVVPPPM +++ +N V F H
Sbjct: 388 DRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTYQLLFPHPVNQVTFLAH 442
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 32.3 bits (70), Expect = 0.61
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +1
Query: 16 SDSQKLLLYTTGNYHWYLKQTLLFNSDQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYS 195
++S +LLYT ++ +L D + I + W IS + +VL + + ++
Sbjct: 2129 TNSSWVLLYTAQLPPEHVDSPVLTVLDSRTIHIQWKQPRKISGILERYVLYMSNHTHDFT 2188
Query: 196 WIWNINHSKGKSINDDAVVVVIDGKKILV 282
IW++ ++ + D + V+ G K L+
Sbjct: 2189 -IWSVIYNSTELFQDHMLQYVLPGNKYLI 2216
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 32.3 bits (70), Expect = 0.61
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +1
Query: 16 SDSQKLLLYTTGNYHWYLKQTLLFNSDQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYS 195
++S +LLYT ++ +L D + I + W IS + +VL + + ++
Sbjct: 2129 TNSSWVLLYTAQLPPEHVDSPVLTVLDSRTIHIQWKQPRKISGILERYVLYMSNHTHDFT 2188
Query: 196 WIWNINHSKGKSINDDAVVVVIDGKKILV 282
IW++ ++ + D + V+ G K L+
Sbjct: 2189 -IWSVIYNSTELFQDHMLQYVLPGNKYLI 2216
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 32.3 bits (70), Expect = 0.61
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +1
Query: 16 SDSQKLLLYTTGNYHWYLKQTLLFNSDQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYS 195
++S +LLYT ++ +L D + I + W IS + +VL + + ++
Sbjct: 2129 TNSSWVLLYTAQLPPEHVDSPVLTVLDSRTIHIQWKQPRKISGILERYVLYMSNHTHDFT 2188
Query: 196 WIWNINHSKGKSINDDAVVVVIDGKKILV 282
IW++ ++ + D + V+ G K L+
Sbjct: 2189 -IWSVIYNSTELFQDHMLQYVLPGNKYLI 2216
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 32.3 bits (70), Expect = 0.61
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +1
Query: 16 SDSQKLLLYTTGNYHWYLKQTLLFNSDQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYS 195
++S +LLYT ++ +L D + I + W IS + +VL + + ++
Sbjct: 2129 TNSSWVLLYTAQLPPEHVDSPVLTVLDSRTIHIQWKQPRKISGILERYVLYMSNHTHDFT 2188
Query: 196 WIWNINHSKGKSINDDAVVVVIDGKKILV 282
IW++ ++ + D + V+ G K L+
Sbjct: 2189 -IWSVIYNSTELFQDHMLQYVLPGNKYLI 2216
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 32.3 bits (70), Expect = 0.61
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +1
Query: 16 SDSQKLLLYTTGNYHWYLKQTLLFNSDQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYS 195
++S +LLYT ++ +L D + I + W IS + +VL + + ++
Sbjct: 2129 TNSSWVLLYTAQLPPEHVDSPVLTVLDSRTIHIQWKQPRKISGILERYVLYMSNHTHDFT 2188
Query: 196 WIWNINHSKGKSINDDAVVVVIDGKKILV 282
IW++ ++ + D + V+ G K L+
Sbjct: 2189 -IWSVIYNSTELFQDHMLQYVLPGNKYLI 2216
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 32.3 bits (70), Expect = 0.61
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +1
Query: 16 SDSQKLLLYTTGNYHWYLKQTLLFNSDQKIIKLMWDNDFNISNNKKLHVLLNTGEYYTYS 195
++S +LLYT ++ +L D + I + W IS + +VL + + ++
Sbjct: 2129 TNSSWVLLYTAQLPPEHVDSPVLTVLDSRTIHIQWKQPRKISGILERYVLYMSNHTHDFT 2188
Query: 196 WIWNINHSKGKSINDDAVVVVIDGKKILV 282
IW++ ++ + D + V+ G K L+
Sbjct: 2189 -IWSVIYNSTELFQDHMLQYVLPGNKYLI 2216
>BC131735-1|AAI31736.1| 2371|Homo sapiens neuroblastoma-amplified
protein protein.
Length = 2371
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 190 YSWIWNINHSKGKSINDDAVVVVIDGKKI-LVSSFKQTVVPP 312
YS +++++ S+ + ++D+AV + +DG+ + ++ + V P
Sbjct: 1987 YSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGP 2028
>BC051792-1|AAH51792.2| 1418|Homo sapiens NAG protein protein.
Length = 1418
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 190 YSWIWNINHSKGKSINDDAVVVVIDGKKI-LVSSFKQTVVPP 312
YS +++++ S+ + ++D+AV + +DG+ + ++ + V P
Sbjct: 1034 YSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGP 1075
>AL591042-2|CAI14458.1| 753|Homo sapiens vav 3 oncogene protein.
Length = 753
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 615 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 654
>AL591042-1|CAI14457.1| 847|Homo sapiens vav 3 oncogene protein.
Length = 847
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 709 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 748
>AL513206-2|CAH73196.1| 753|Homo sapiens vav 3 oncogene protein.
Length = 753
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 615 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 654
>AL513206-1|CAH73195.1| 847|Homo sapiens vav 3 oncogene protein.
Length = 847
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 709 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 748
>AL391235-1|CAH72458.1| 847|Homo sapiens vav 3 oncogene protein.
Length = 847
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 709 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 748
>AL353892-1|CAI21786.1| 847|Homo sapiens vav 3 oncogene protein.
Length = 847
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 709 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 748
>AL050281-1|CAB43382.1| 1296|Homo sapiens hypothetical protein
protein.
Length = 1296
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 190 YSWIWNINHSKGKSINDDAVVVVIDGKKI-LVSSFKQTVVPP 312
YS +++++ S+ + ++D+AV + +DG+ + ++ + V P
Sbjct: 912 YSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGP 953
>AF388385-1|AAM93544.1| 2371|Homo sapiens neuroblastoma-amplified
protein protein.
Length = 2371
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 190 YSWIWNINHSKGKSINDDAVVVVIDGKKI-LVSSFKQTVVPP 312
YS +++++ S+ + ++D+AV + +DG+ + ++ + V P
Sbjct: 1987 YSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGP 2028
>AF118887-1|AAD20349.1| 847|Homo sapiens VAV-3 protein protein.
Length = 847
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 709 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 748
>AF118886-1|AAD20348.1| 753|Homo sapiens VAV-3 protein beta isoform
protein.
Length = 753
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 615 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 654
>AF067817-1|AAC79695.1| 847|Homo sapiens VAV-3 protein protein.
Length = 847
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 76 TLLFNSDQKIIKLMW-DNDFNISNNKKLHVLLNTGEYYTY 192
++ +N++ K IK++ D F+I+ N+K L+ EYY +
Sbjct: 709 SIKYNNEAKHIKILTRDGFFHIAENRKFKSLMELVEYYKH 748
>AC008282-1|AAY24347.1| 1060|Homo sapiens unknown protein.
Length = 1060
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 190 YSWIWNINHSKGKSINDDAVVVVIDGKKI-LVSSFKQTVVPP 312
YS +++++ S+ + ++D+AV + +DG+ + ++ + V P
Sbjct: 676 YSHLYDLSRSEKEKLHDEAVAICLDGQPLAMIQQLLEVAVGP 717
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.133 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,212,226
Number of Sequences: 237096
Number of extensions: 1109692
Number of successful extensions: 1411
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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