Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D14
         (333 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119474-1|AAM50128.1|  694|Drosophila melanogaster GH05505p pro...    27   4.4  
AJ002073-1|CAA05172.1| 1073|Drosophila melanogaster hormone rece...    27   4.4  
AE014297-929|AAF54372.1|  694|Drosophila melanogaster CG8135-PA ...    27   4.4  
AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB...    27   4.4  

>AY119474-1|AAM50128.1|  694|Drosophila melanogaster GH05505p
           protein.
          Length = 694

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 263 LLAVSAALPAWNSDNLLVYVLPIDVNST 180
           +L   + L AW    L+V+ +P+DV ST
Sbjct: 31  ILVTLSVLTAWCFSFLIVFTIPLDVTST 58


>AJ002073-1|CAA05172.1| 1073|Drosophila melanogaster hormone
           receptor 38 protein.
          Length = 1073

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 140 AC*AKQINKQTERQKNLN-LRHVFCTDT-TPHPLQPPSYLKLPIILP 6
           +C  + +N  T +Q + + L+H     T   HPL PP    LP+I P
Sbjct: 50  SCYRQNLNAPTHQQSHTSHLQHAQQHQTHQQHPLLPPPLPTLPLIYP 96


>AE014297-929|AAF54372.1|  694|Drosophila melanogaster CG8135-PA
           protein.
          Length = 694

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 263 LLAVSAALPAWNSDNLLVYVLPIDVNST 180
           +L   + L AW    L+V+ +P+DV ST
Sbjct: 31  ILVTLSVLTAWCFSFLIVFTIPLDVTST 58


>AE014134-3270|AAF53914.1| 1078|Drosophila melanogaster CG1864-PB,
           isoform B protein.
          Length = 1078

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 140 AC*AKQINKQTERQKNLN-LRHVFCTDT-TPHPLQPPSYLKLPIILP 6
           +C  + +N  T +Q + + L+H     T   HPL PP    LP+I P
Sbjct: 50  SCYRQNLNAPTHQQSHTSHLQHAQQHQTHQQHPLLPPPLPTLPLIYP 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,380,709
Number of Sequences: 53049
Number of extensions: 241020
Number of successful extensions: 404
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)