Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D13
         (593 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095424-1|AAH95424.1|  132|Homo sapiens ribosomal protein S12 p...   109   1e-23
BC071930-1|AAH71930.1|  132|Homo sapiens ribosomal protein S12 p...   109   1e-23
BC017321-1|AAH17321.1|  132|Homo sapiens ribosomal protein S12 p...   109   1e-23
AL137783-3|CAC12946.1|  132|Homo sapiens ribosomal protein S12 p...   109   1e-23
AB061840-1|BAB79478.1|  132|Homo sapiens ribosomal protein S12 p...   109   1e-23
X53505-1|CAA37582.1|  132|Homo sapiens ribosomal protein S12 pro...   103   6e-22

>BC095424-1|AAH95424.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  109 bits (261), Expect = 1e-23
 Identities = 44/64 (68%), Positives = 57/64 (89%)
 Frame = -2

Query: 283 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 104
           +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125

Query: 103 DYLK 92
           +Y K
Sbjct: 126 EYFK 129


>BC071930-1|AAH71930.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  109 bits (261), Expect = 1e-23
 Identities = 44/64 (68%), Positives = 57/64 (89%)
 Frame = -2

Query: 283 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 104
           +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125

Query: 103 DYLK 92
           +Y K
Sbjct: 126 EYFK 129


>BC017321-1|AAH17321.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  109 bits (261), Expect = 1e-23
 Identities = 44/64 (68%), Positives = 57/64 (89%)
 Frame = -2

Query: 283 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 104
           +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125

Query: 103 DYLK 92
           +Y K
Sbjct: 126 EYFK 129


>AL137783-3|CAC12946.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  109 bits (261), Expect = 1e-23
 Identities = 44/64 (68%), Positives = 57/64 (89%)
 Frame = -2

Query: 283 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 104
           +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125

Query: 103 DYLK 92
           +Y K
Sbjct: 126 EYFK 129


>AB061840-1|BAB79478.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  109 bits (261), Expect = 1e-23
 Identities = 44/64 (68%), Positives = 57/64 (89%)
 Frame = -2

Query: 283 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 104
           +ALC EHQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIE 125

Query: 103 DYLK 92
           +Y K
Sbjct: 126 EYFK 129


>X53505-1|CAA37582.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  103 bits (246), Expect = 6e-22
 Identities = 42/64 (65%), Positives = 55/64 (85%)
 Frame = -2

Query: 283 QALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLK 104
           +AL  EHQI L+KVD+NKKLGEW GLCKID++G  RK+VGCSCVV+KD+G+E+ A DV++
Sbjct: 66  EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIE 125

Query: 103 DYLK 92
           +Y K
Sbjct: 126 EYFK 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,545,413
Number of Sequences: 237096
Number of extensions: 1189237
Number of successful extensions: 1970
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)