Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D12
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p pro...    98   7e-21
AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p pro...    98   7e-21
AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA...    98   7e-21
BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...    33   0.29 
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...    33   0.29 
AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA...    31   1.2  
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran...    29   3.6  

>BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p
           protein.
          Length = 468

 Score = 97.9 bits (233), Expect = 7e-21
 Identities = 45/78 (57%), Positives = 57/78 (73%)
 Frame = +1

Query: 268 IHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNVGDSVAADEVVLEIETDKTAIPVMAPGH 447
           IH T++L+ EQ V  P F DS++EGD+K +  VGDS AADE V+EIETDKT + V AP  
Sbjct: 67  IHTTSSLWSEQTVNVPPFADSIAEGDIKFTCKVGDSFAADEAVMEIETDKTTVAVPAPFS 126

Query: 448 GVIKELYVKDGDTVKAGQ 501
           G + ++ VKDGDTVK GQ
Sbjct: 127 GTLTDILVKDGDTVKPGQ 144


>AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p
           protein.
          Length = 468

 Score = 97.9 bits (233), Expect = 7e-21
 Identities = 45/78 (57%), Positives = 57/78 (73%)
 Frame = +1

Query: 268 IHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNVGDSVAADEVVLEIETDKTAIPVMAPGH 447
           IH T++L+ EQ V  P F DS++EGD+K +  VGDS AADE V+EIETDKT + V AP  
Sbjct: 67  IHTTSSLWSEQTVNVPPFADSIAEGDIKFTCKVGDSFAADEAVMEIETDKTTVAVPAPFS 126

Query: 448 GVIKELYVKDGDTVKAGQ 501
           G + ++ VKDGDTVK GQ
Sbjct: 127 GTLTDILVKDGDTVKPGQ 144


>AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA
           protein.
          Length = 468

 Score = 97.9 bits (233), Expect = 7e-21
 Identities = 45/78 (57%), Positives = 57/78 (73%)
 Frame = +1

Query: 268 IHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNVGDSVAADEVVLEIETDKTAIPVMAPGH 447
           IH T++L+ EQ V  P F DS++EGD+K +  VGDS AADE V+EIETDKT + V AP  
Sbjct: 67  IHTTSSLWSEQTVNVPPFADSIAEGDIKFTCKVGDSFAADEAVMEIETDKTTVAVPAPFS 126

Query: 448 GVIKELYVKDGDTVKAGQ 501
           G + ++ VKDGDTVK GQ
Sbjct: 127 GTLTDILVKDGDTVKPGQ 144


>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +1

Query: 286 LYEEQDVMTPSFPDSVSEGD-VKLSKNVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKE 462
           L E   V  P+   ++  G  V   K  GD +   +++ EIETDK  +    P  G + +
Sbjct: 77  LPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAK 136

Query: 463 LYVKDG-DTVKAGQ 501
           + ++ G   V  GQ
Sbjct: 137 ILIQGGTKDVPVGQ 150


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +1

Query: 286 LYEEQDVMTPSFPDSVSEGD-VKLSKNVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKE 462
           L E   V  P+   ++  G  V   K  GD +   +++ EIETDK  +    P  G + +
Sbjct: 77  LPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAK 136

Query: 463 LYVKDG-DTVKAGQ 501
           + ++ G   V  GQ
Sbjct: 137 ILIQGGTKDVPVGQ 150


>AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA,
           isoform A protein.
          Length = 421

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 346 VKLSKNVGDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDG-DTVKAGQ 501
           V   K  GD +   +++ EIETDK  +    P  G + ++ ++ G   V  GQ
Sbjct: 7   VSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAKILIQGGTKDVPVGQ 59


>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 1088

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 91  IFKMLRRCSKHLQTIYRRQGQSLRYKSSEVP 183
           I +++R+C   L+  Y RQ Q + Y+ SE+P
Sbjct: 782 ITQLIRKCETCLKLKYDRQPQKITYQISELP 812


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,146,510
Number of Sequences: 53049
Number of extensions: 414697
Number of successful extensions: 1282
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)