Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D12
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 71 4e-13
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 34 0.051
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z30662-6|CAE17936.1| 295|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 27 7.7
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 27 7.7
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 71.3 bits (167), Expect = 4e-13
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +1
Query: 262 ASIHFTNTLYEEQDVMT---PSFPDSVSEGDVKLSKNVGDSVAADEVVLEIETDKTAIPV 432
+S +F + DV+T P+F +S+SEGD++ K GD V DE+V EIETDKT++ V
Sbjct: 49 SSANFHMSAVRMSDVITVEGPAFAESISEGDIRWLKQKGDHVNEDELVAEIETDKTSVEV 108
Query: 433 MAPGHGVIKELYVKDGDTVKAGQK 504
AP G I E V+DG V A QK
Sbjct: 109 PAPQAGTIVEFLVEDGAKVTAKQK 132
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.051
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 268 IHFTNTLYEEQDVMTPSFPDSVSEGDV-KLSKNVGDSVAADEVVLEIETDKTAIPVMAPG 444
++ + L + V P+ ++ G V K GD ++ +++ EIETDK + P
Sbjct: 68 LYSSGNLPKHNRVALPALSPTMELGTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPE 127
Query: 445 HGVIKELYVKDG 480
G + ++ +++G
Sbjct: 128 EGYLAKILIQEG 139
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.067
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 367 GDSVAADEVVLEIETDKTAIPVMAPGHGVIKELYVKDGDTVKAGQ 501
GD+++ + V E+++DK A+ + G++K+LY + + GQ
Sbjct: 55 GDTISQFDKVCEVQSDKAAVTISCRYDGIVKKLYHEVDGMARVGQ 99
>Z30662-6|CAE17936.1| 295|Caenorhabditis elegans Hypothetical
protein T16H12.11 protein.
Length = 295
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 155 LCPCLRYIVCKCFEQRRNILKIYWRLLTFWMS 60
LCP + I K F + N L +Y+R T+W S
Sbjct: 59 LCPLKKKI--KRFHKESNTLDVYFRSQTYWRS 88
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 FGALPQSAVRLNQSRVIVAAH-NQVASIHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNV 366
F + P+S R + V H +V S T TPS PDS++ +V
Sbjct: 1027 FDSPPESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSV 1086
Query: 367 GDSVAAD 387
+++AD
Sbjct: 1087 PTNISAD 1093
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 FGALPQSAVRLNQSRVIVAAH-NQVASIHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNV 366
F + P+S R + V H +V S T TPS PDS++ +V
Sbjct: 747 FDSPPESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSV 806
Query: 367 GDSVAAD 387
+++AD
Sbjct: 807 PTNISAD 813
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 FGALPQSAVRLNQSRVIVAAH-NQVASIHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNV 366
F + P+S R + V H +V S T TPS PDS++ +V
Sbjct: 747 FDSPPESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSV 806
Query: 367 GDSVAAD 387
+++AD
Sbjct: 807 PTNISAD 813
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 FGALPQSAVRLNQSRVIVAAH-NQVASIHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNV 366
F + P+S R + V H +V S T TPS PDS++ +V
Sbjct: 1029 FDSPPESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSV 1088
Query: 367 GDSVAAD 387
+++AD
Sbjct: 1089 PTNISAD 1095
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 190 FGALPQSAVRLNQSRVIVAAH-NQVASIHFTNTLYEEQDVMTPSFPDSVSEGDVKLSKNV 366
F + P+S R + V H +V S T TPS PDS++ +V
Sbjct: 1027 FDSPPESTTRTVIRYLNVTVHAKEVKSAGTPTTSATNVPNATPSTPDSIASSSTNTDNSV 1086
Query: 367 GDSVAAD 387
+++AD
Sbjct: 1087 PTNISAD 1093
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,883,543
Number of Sequences: 27780
Number of extensions: 214211
Number of successful extensions: 529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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