Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D12
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.0  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   5.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.5  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   7.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 107 DAAQNTCRRYIEGRGRVFDTSLQR 178
           DA +N CR Y++ +  V + SL +
Sbjct: 568 DADKNQCRHYLDAKSSVQNYSLAK 591


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 134 IVCKCFEQRR 105
           I+CKCF +RR
Sbjct: 76  IICKCFCKRR 85


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 134 IVCKCFEQRR 105
           I+CKCF +RR
Sbjct: 524 IICKCFCKRR 533


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/41 (26%), Positives = 16/41 (39%)
 Frame = -3

Query: 131 VCKCFEQRRNILKIYWRLLTFWMS*TTPISERYSYFTDINW 9
           VC   +    I ++   +  FW      ISE   Y  +I W
Sbjct: 134 VCSVNDVNMTITELTDPVKEFWERRALQISEGVEYVGNIRW 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,237
Number of Sequences: 438
Number of extensions: 2630
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)