Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D11
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 147 4e-36
U88177-3|AAB42292.1| 191|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical ... 32 0.30
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 29 2.1
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 29 2.1
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 2.8
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 3.7
AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical ... 28 3.7
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 28 4.9
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 27 6.5
AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical ... 27 6.5
U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical pr... 27 8.6
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 147 bits (357), Expect = 4e-36
Identities = 70/140 (50%), Positives = 96/140 (68%), Gaps = 3/140 (2%)
Frame = +2
Query: 11 ERHKERQRDRNLSRAAPDKRSKLVKDRERDISEQIALGMP-AKSAQGAEAMFDQRLFNNT 187
+R + +++RN++R+ PDK KL K+RERDISE+I LG+P + E FDQRLF+ T
Sbjct: 361 DRLDDIRKERNIARSRPDKADKLRKERERDISEKIVLGLPDTNQKRTGEPQFDQRLFDKT 420
Query: 188 KGMDSGYGDDEAYNVYDKPWRNQDNIGTHIYRPTRNADKDNY-SDIDAIANTR-RFVADK 361
+G+DSG DD+ YN YD WR D++ H+YRP++N D D Y D+D I + RFVADK
Sbjct: 421 QGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSKNLDNDVYGGDLDKIIEQKNRFVADK 480
Query: 362 EFAGTSSTNARSGPVQFEKD 421
F+G ++ SGPVQFEKD
Sbjct: 481 GFSGAEGSSRGSGPVQFEKD 500
>U88177-3|AAB42292.1| 191|Caenorhabditis elegans Hypothetical
protein F53E10.6 protein.
Length = 191
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +2
Query: 23 ERQRDRNLSRAAPDKRSKL---VKDRERDISEQIALGMPAKSAQGAEAMFDQRLFNNTKG 193
+R+++RNL R A +L V DR++ +S+ + M A+ + A FD + F++ +
Sbjct: 93 DREKERNLRRVATKGVVQLFNAVSDRQKTMSDAVKEKMTARERREARQRFDGKNFDSDRF 152
Query: 194 MDSGY-GDDEAYNVYDKPWRNQDNIGTHIYRPTRNADKDNYSDID 325
DSGY G + D +Q +IG D NYSD D
Sbjct: 153 ADSGYVGAKKEVKGEDDDGEDQMDIG------EEQIDTGNYSDED 191
>AF106583-7|AAD03130.1| 299|Caenorhabditis elegans Hypothetical
protein F23C8.4 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.30
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 17 HKERQRDRNLSRAAPDKRSKLVKDR--ERDISEQIALGMPAKSAQGA 151
HKE RDR + AA D+R + +D + + EQI L A+ A+ +
Sbjct: 152 HKEAARDREIREAAQDRRREKNEDEIARKRVLEQIRLDKEARKAKAS 198
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 8 AERHKERQRDR--NLSRAAPDKRSKLVKDRERDISEQIALGMPAKSAQGAE 154
++R K +RD+ N R KR K +K + G+PAKSA+ A+
Sbjct: 50 SKRSKRSKRDKKQNSKRQQNSKRQKKIKSNSAAPAPPAKSGVPAKSAEKAK 100
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 8 AERHKERQRDR--NLSRAAPDKRSKLVKDRERDISEQIALGMPAKSAQGAE 154
++R K +RD+ N R KR K +K + G+PAKSA+ A+
Sbjct: 50 SKRSKRSKRDKKQNSKRQQNSKRQKKIKSNSAAPAPPAKSGVPAKSAEKAK 100
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 14 RHKERQRDRNLSRAAPDKRSKLVKDRERDISEQIALGMP 130
RH +RQ +R+L +R+ L +DR+R+ ++A G+P
Sbjct: 372 RHLQRQEERDLEMHLRFRRT-LDQDRDRESMRRVADGLP 409
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 5 EAERHKERQRDRNLSRAAPDKRSKLVKDRERD 100
E +R + R RDR+ R+ D+ +DR+RD
Sbjct: 883 ERKRSRSRSRDRDRDRSRRDRSRDRSRDRDRD 914
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 5 EAERHKERQRDRNLSRAAPDKRSKLVKDRERDIS 106
E +R KER+R R+ SR RS+ +DR RD S
Sbjct: 877 EKKRDKERKRSRSRSRDRDRDRSR--RDRSRDRS 908
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 5 EAERHKERQRDRNLSRAAPDKRSKLVKDRERDISEQIALGMPAKSAQ 145
+A + + RD + +A P+K V + RD+S + A+ +PA + +
Sbjct: 927 DAPKVAAKPRDPSPKKAVPEKEPAKVAAKPRDLSPKKAIPIPANTQE 973
>AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical
protein Y61A9LA.8 protein.
Length = 740
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 5 EAERHKERQRDRNLSRAAPDKRSKLVKDRE 94
E ER KERQR+R+ + A +++ + K +E
Sbjct: 126 EKEREKERQRERDREKRAEEEKRREEKRKE 155
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 398 GPVQFEKDAPNREEPSRSGQADADFDPFGLDRFL 499
G E+ EEP SG + D P LD F+
Sbjct: 162 GDEDVEETVQEEEEPEESGTSSRDSTPMDLDHFM 195
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 398 GPVQFEKDAPNREEPSRSGQADADFDPFGLDRFL 499
G E+ EEP SG + D P LD F+
Sbjct: 162 GDEDVEETVQEEEEPEESGTSSRDSTPMDLDHFM 195
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +2
Query: 284 PTRNADKDNY-SDIDAIANTRRFVADKEFAGTSSTNARSGPVQFEKDAPNREEPSRSGQA 460
P R D D + S DA F DK++ ++ ++ P NR
Sbjct: 74 PPRERDPDPFGSHNDAPDGNDYFGGDKDYRSGAAASSEEEPFSDTDYRVNRRRRLSPSHD 133
Query: 461 DADFDP 478
D DFDP
Sbjct: 134 DGDFDP 139
>Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical
protein F55A11.2 protein.
Length = 413
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 47 SRAAPDKRSKLVKDRERDISEQIALGMPAKSAQGAEAMFDQR 172
S + + RSKL++D E+ S IAL M A S ++ QR
Sbjct: 276 SSSGANVRSKLLQDDEQHGSSSIALDMGALSNMQSQQTMQQR 317
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 359 KEFAGTSSTNARSGPVQFEKDAPNREEPSR 448
K F T ST+ + + ++ P RE P+R
Sbjct: 238 KNFVATPSTSKSTASYSYSRETPKRETPAR 267
>AC006807-5|AAK84619.1| 349|Caenorhabditis elegans Hypothetical
protein Y58A7A.5 protein.
Length = 349
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Frame = +2
Query: 221 AYNVYDKPWRNQDNIGTHIY-----------RPTRNADKDNYSDID 325
+YN+Y K R+QD +G ++ RP + D +NY D+D
Sbjct: 259 SYNIY-KTHRSQDVVGKEMFKAKVVSKSRRHRPNKKVDMENYDDLD 303
>U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical
protein M02E1.1b protein.
Length = 688
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +2
Query: 296 ADKDNYSDIDAIANTRRFVADKEFAGTSSTNARSGPVQFEKDAPNREEPSRSGQADADFD 475
AD D Y DAIA +FA SS+N + + PS + + +
Sbjct: 462 ADDDEY---DAIAGPEHLPGSSDFAADSSSNELATSTTPVSTSSEFSLPSSTAELKKEDS 518
Query: 476 PFGLDRFLSEAKRADK 523
P G F +E + + K
Sbjct: 519 PGGCSGFQNEIQSSIK 534
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical
protein M02E1.1a protein.
Length = 1077
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/76 (26%), Positives = 30/76 (39%)
Frame = +2
Query: 296 ADKDNYSDIDAIANTRRFVADKEFAGTSSTNARSGPVQFEKDAPNREEPSRSGQADADFD 475
AD D Y DAIA +FA SS+N + + PS + + +
Sbjct: 462 ADDDEY---DAIAGPEHLPGSSDFAADSSSNELATSTTPVSTSSEFSLPSSTAELKKEDS 518
Query: 476 PFGLDRFLSEAKRADK 523
P G F +E + + K
Sbjct: 519 PGGCSGFQNEIQSSIK 534
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,562,294
Number of Sequences: 27780
Number of extensions: 247748
Number of successful extensions: 1026
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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