Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D09
(582 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 242 3e-65
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 201 7e-53
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 180 1e-46
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 169 2e-43
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 152 4e-38
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 123 2e-29
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 107 9e-25
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 87 2e-18
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 63 3e-11
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 26 3.5
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 3.5
SPAC1F8.03c |str3||siderophore-iron transporter Str3 |Schizosacc... 26 3.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 4.6
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 25 8.1
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 25 8.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 8.1
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 242 bits (592), Expect = 3e-65
Identities = 111/146 (76%), Positives = 120/146 (82%)
Frame = +2
Query: 122 VGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 301
+GRIV +L DV PKT NFRALCTGEKG+GY GSTFHRVIP FMLQGGDFT NGTGGK
Sbjct: 15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGK 74
Query: 302 SIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 481
SIYGEKF DENF LKH PG+LSMANAGPNTNGSQFFITTV T WLDG+HVVFG V EGM
Sbjct: 75 SIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGM 134
Query: 482 DVVKQVELYGSQAGKTTKKIVVSDCG 559
DVVK+VE GS +G T +IV+ CG
Sbjct: 135 DVVKKVESLGSNSGATRARIVIDKCG 160
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 201 bits (490), Expect = 7e-53
Identities = 93/150 (62%), Positives = 111/150 (74%), Gaps = 1/150 (0%)
Frame = +2
Query: 122 VGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGK 301
+GR+ + L PKT ENFRAL TGEKGFGY+GS FHRVIPNFM+QGGD T +GTGGK
Sbjct: 40 LGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGK 99
Query: 302 SIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 481
SIYG +F DENF L H PG+LSMANAGP++NGSQFFITTVKT WLDG HVVFG V+ G
Sbjct: 100 SIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGY 159
Query: 482 DVVKQV-ELYGSQAGKTTKKIVVSDCGQLS 568
D+VK++ + K + + + GQLS
Sbjct: 160 DIVKKISKAETDNRDKPLEDVKIIKSGQLS 189
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 180 bits (438), Expect = 1e-46
Identities = 88/147 (59%), Positives = 104/147 (70%), Gaps = 4/147 (2%)
Frame = +2
Query: 131 IVVELRTDVTPKTCENFRALCTGEKGFG----YKGSTFHRVIPNFMLQGGDFTNHNGTGG 298
I EL +V PKT +NF +LC G + G YKGS FHRVI NFMLQGGDFT NGTGG
Sbjct: 19 IYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGG 78
Query: 299 KSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEG 478
+SIYGEKF DENF LKH P +LSMANAGPNTNGSQFFITTV T LDG+HVVFG V++G
Sbjct: 79 ESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQG 138
Query: 479 MDVVKQVELYGSQAGKTTKKIVVSDCG 559
V+ +E ++ +V+ +CG
Sbjct: 139 KSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 169 bits (412), Expect = 2e-43
Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 8/156 (5%)
Frame = +2
Query: 122 VGRIVVELRTDVTPKTCENFRALCTGE------KGFGYKGSTFHRVIPNFMLQGGDFTNH 283
+GRI + L + + PKT ENFR CTGE K GYK STFHR+I FM+QGGDF +
Sbjct: 18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSG 77
Query: 284 NGTGGKSIYGEK-FGDENFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVF 460
+GTG +I+ + F DENF LKH PG+LSMANAG ++NG QFFITTV +LDG+HVVF
Sbjct: 78 DGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVF 137
Query: 461 GNVVEGMDVVKQVELYGSQAGKTTK-KIVVSDCGQL 565
G V+EG D+VK++E A K + + +CG++
Sbjct: 138 GEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 152 bits (368), Expect = 4e-38
Identities = 74/130 (56%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = +2
Query: 119 TVGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGG 298
++G+I++EL T+ PKTC+NF L ++G+ Y G FHRVIP+F++QGGD T G GG
Sbjct: 9 SLGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGG 64
Query: 299 KSIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVE 475
SIYG+KF DE + L HTG G+LSMANAGPNTN SQFFIT T WLDG+H +FG VV
Sbjct: 65 TSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVS 124
Query: 476 GMDVVKQVEL 505
G+ V K++ L
Sbjct: 125 GLSVCKRMGL 134
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 123 bits (297), Expect = 2e-29
Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 119 TVGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGG 298
T G I ++L + PK +NF E G+ Y + FHR+I NFM+QGGD +GTGG
Sbjct: 462 TQGDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGG 517
Query: 299 KSIYGEKFGDE-NFVLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVE 475
+SI+ + F DE + LKH P +SMAN+GPNTNGSQFFITT T WLDG+H +F
Sbjct: 518 ESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYA 577
Query: 476 GMDVVKQVE 502
G+DVV ++E
Sbjct: 578 GLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 107 bits (258), Expect = 9e-25
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
Frame = +2
Query: 125 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGGKS 304
G I +EL TD P NF L ++G+ Y+ + FHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 305 IYGEKFGDENF-VLKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVVEGM 481
I+G+ F DE LKH G++SMAN G NTNGSQFFI LD +H +FG VV G+
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGL 400
Query: 482 DVVKQVE 502
+V+ +E
Sbjct: 401 NVLDALE 407
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 87.0 bits (206), Expect = 2e-18
Identities = 52/119 (43%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +2
Query: 119 TVGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGG 298
T G I +EL PK C NF LC +G+ Y G+ HRV+P F++QGGD T G GG
Sbjct: 20 TRGDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGG 75
Query: 299 KSIYGEKFGDENFV-LKHTGPGVLSMANAGPNTNGSQFFITTVKTSWLDGRHVVFGNVV 472
+SIYGE F E L+ G++ MA N SQFFIT T +G+ +FG VV
Sbjct: 76 ESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 62.9 bits (146), Expect = 3e-11
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Frame = +2
Query: 119 TVGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGGDFTNHNGTGG 298
TVG +V++L PKTCENF LC K Y F+ + N+ Q GD G GG
Sbjct: 8 TVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGDGG 64
Query: 299 KSIY-----GEKF--GDENFVLKHTGPGVLSMANAGPNTN-------GSQFFIT-TVKTS 433
+ ++ G +F + N L H G++SM+ A ++ GSQF IT +
Sbjct: 65 RCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLE 124
Query: 434 WLDGRHVVFGNVVEGMDVVKQV 499
LD R+ ++G V EG D + ++
Sbjct: 125 GLDERYPIYGQVAEGFDTLLKI 146
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 26.2 bits (55), Expect = 3.5
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = -3
Query: 415 NEELRTIGVRTRISHREHSRSSMLQDEVLIAELLAVDGLSTGTIVVCKVTTLQHEVGDDT 236
N+ + G+ T I + RS + I L+ +GL+ + KVTT Q+ +
Sbjct: 14 NQTNQLKGLFTIIRDKTKPRSEFIFYANRIIRLIVEEGLNHLPVSSAKVTTAQNAEYEGV 73
Query: 235 VESGAFVAEALLASTESSEVFTGLR 161
+ G +++ + ES E GLR
Sbjct: 74 MFDGRICGVSIMRAGESME--QGLR 96
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 VVFGNVVEGMD-VVKQVELYGSQAGKTTKKIVVSDCGQLS 568
V +G V +D + ++++ YG +T++ + V+D GQ++
Sbjct: 1439 VNYGVTVSELDPITRRMDYYGPVVNRTSRVVSVADGGQIA 1478
>SPAC1F8.03c |str3||siderophore-iron transporter Str3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 3.5
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 504 SSTCFTTSIPSTTFPNTTCLPSSHEVLTVVMKN-CEPLVLGPALAIESTP 358
SST ++ + +T N T + S+ E+ T ++ + C+P +LG I S P
Sbjct: 102 SSTTYSYQVYATASFNRTSMISTLEIATAIISSVCKP-ILGKFSDITSRP 150
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 4.6
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 462 ET*LKEWTL*SKLSFMVLRLARLQRKLSSLIADNYPKSNL 581
E L++ L S+LS VL LQRK+SSL + + +SNL
Sbjct: 226 EASLEKSQLSSQLSDAVLEKDALQRKVSSL-SQQFTESNL 264
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 25.0 bits (52), Expect = 8.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 310 VDGLSTGTIVVCKVTTLQHEVGDDTVESGAF-VAEALLASTESSEV 176
V+ + IVV KVT HE D+V + V+ L T SS+V
Sbjct: 620 VEMVERNGIVVPKVTVTSHEDDVDSVHNTPMSVSSTLSVKTSSSKV 665
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -3
Query: 535 LCSLASLRTIKLNLLHNVHSFNYVSKHHMSTIQP*GLNSGNEELRTI 395
L +S + K L+ N FNY+ + + STI+ G+N E T+
Sbjct: 281 LAGSSSEQLEKWKLVENSQEFNYLKQGNCSTIE--GVNDKEEFKATV 325
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 8.1
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = -1
Query: 558 PQSETTIFFVVLPA*EP*SSTCFTTSIPSTTFPNTTCLPSSHEVLTVVMKNCEPLVLGPA 379
P S T+ F + SS+ FTT+ S + ++ LPSS V++ + ++ P
Sbjct: 192 PASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSS--VISSASLSSSSVL--PT 247
Query: 378 LAIESTPGPVCFRTKFSSPNFSP 310
I ST PV + S +F+P
Sbjct: 248 SIITSTSTPVTVSSS-SLSSFTP 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,491,189
Number of Sequences: 5004
Number of extensions: 53411
Number of successful extensions: 187
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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