Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D09
(582 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 27 0.18
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.95
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 1.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 3.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.1
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 6.7
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 6.7
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 8.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 8.9
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 8.9
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 8.9
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 8.9
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 26.6 bits (56), Expect = 0.18
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = -3
Query: 517 LRTIKLNLLHNVHSFNYVSKHHMSTIQP*GLNSGNEELRTI 395
+R ++ + + + + KH ++ + P G+N G +L+ I
Sbjct: 432 IRHSQIGISRAMSALRILEKHELANVHPVGINPGKMQLKNI 472
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 0.95
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 253 EVGD-DTVESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPSHGDPSAVTSKKTRGKD 77
E GD DT + + V + L + + G R + YN GDPS + + +T+G
Sbjct: 1406 EFGDWDTAQISSTVQKYTLEN-----LLCGSRYQIYVTAYNGIGTGDPSDMLNTRTKGSK 1460
Query: 76 ILV 68
++
Sbjct: 1461 PII 1463
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 1.3
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = -1
Query: 483 SIPSTTFPNTTCLPSSHEVLTVVMKNCEPLVLGPALAIESTPGPVCFRTKFSSPNFSP 310
S +T+ +T+ P+S T+V+ C ++ + I + P+ K SP+ P
Sbjct: 831 SAAATSSTSTSPRPASSTAATLVLSGCPSNMMELQVDIADSQQPLNLSKKSPSPSPRP 888
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 213 ATKAPLSTVSSPTSCC 260
A K+PL +VSS S C
Sbjct: 485 AVKSPLGSVSSTESTC 500
Score = 21.0 bits (42), Expect = 8.9
Identities = 15/71 (21%), Positives = 27/71 (38%)
Frame = -1
Query: 567 DSCPQSETTIFFVVLPA*EP*SSTCFTTSIPSTTFPNTTCLPSSHEVLTVVMKNCEPLVL 388
D+C + + +++ A E + T ++ PN L E+L K P +
Sbjct: 188 DTCDFTRDKVAPILVRARETPNYTACPPTLACPLNPNPQPLTGQQELLQDFSKRFSPAIR 247
Query: 387 GPALAIESTPG 355
G + PG
Sbjct: 248 GVVEFAKRIPG 258
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 242 IPNFMLQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGV 364
+PN + NH+ S +G + GDE +L T PG+
Sbjct: 340 VPNGSVTNWVSGNHDNHRVASRFGRQRGDEIVMLTLTLPGI 380
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 3.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 257 LQGGDFTNHNGTGGKSIYGEKFGDENFVLKHTGPGVLSMANAGPNTNGS 403
+Q GD+ N T + +++GD+ FV+ GV S N N G+
Sbjct: 52 IQSGDY---NYTMNYLLDTDQWGDKTFVIIMKFNGVPSSLNVITNKTGN 97
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 455 VFGNVVEGMDVVKQVELYG 511
V GN+V+G V+LYG
Sbjct: 360 VLGNIVQGNGDSVNVQLYG 378
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +2
Query: 206 GFGYKGSTFHRVIPN 250
GFGY+ + ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 5.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 455 VFGNVVEGMDVVKQVELYG 511
V GN+V+G V+LYG
Sbjct: 360 VLGNIVQGNGDSVNVQLYG 378
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +2
Query: 206 GFGYKGSTFHRVIPN 250
GFGY+ + ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 455 VFGNVVEGMDVVKQVELYGS 514
+ GN++EG E YGS
Sbjct: 361 ILGNIIEGNADSYNTEFYGS 380
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 455 VFGNVVEGMDVVKQVELYGS 514
+ GN++EG E YGS
Sbjct: 361 ILGNIIEGNADSYNTEFYGS 380
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 165 LGVTSVLSSTTILPTVIHQLLR 100
LG+T+VL+ TTI V L R
Sbjct: 276 LGITTVLTMTTISTGVRSSLPR 297
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1
Query: 165 LGVTSVLSSTTIL 127
LGVT+VL+ TT++
Sbjct: 255 LGVTTVLTMTTLM 267
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1
Query: 165 LGVTSVLSSTTIL 127
LGVT+VL+ TT++
Sbjct: 255 LGVTTVLTMTTLM 267
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +2
Query: 206 GFGYKGSTFHRVIPN 250
GFGY+ + ++V+P+
Sbjct: 15 GFGYESNVKYQVVPS 29
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -1
Query: 165 LGVTSVLSSTTIL 127
LGVT+VL+ TT++
Sbjct: 194 LGVTTVLTMTTLM 206
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,500
Number of Sequences: 438
Number of extensions: 4294
Number of successful extensions: 31
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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