Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D06
(240 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 25 0.17
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 0.23
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.30
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 0.30
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 0.69
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 0.69
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 0.69
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 0.69
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 0.69
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 0.69
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 0.69
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 0.69
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 0.69
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 0.69
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 0.69
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 0.69
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 0.69
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 0.69
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 0.69
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 0.69
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 19 6.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 19 6.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 19 6.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 19 6.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 19 6.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 8.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 19 8.5
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 24.6 bits (51), Expect = 0.17
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 150 VSMGAVAGTLCEPVG 106
V++G AG +C+PVG
Sbjct: 282 VAIGTAAGMMCQPVG 296
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 0.23
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 200 RGPWAPLRGYGPHPGFGSPWGLSP 129
+ P AP RG P+P G P G P
Sbjct: 29 QSPQAPQRGSPPNPSQGPPPGGPP 52
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.30
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 6 DPRAEEFDEGR*CAE*LREPSPPR 77
DPR ++E CA R P PPR
Sbjct: 1683 DPRRHMYEELNHCAPNRRCPPPPR 1706
Score = 19.0 bits (37), Expect = 8.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 188 APLRGYGPHPGFGSPWGLS 132
AP R P P GS GLS
Sbjct: 1696 APNRRCPPPPRMGSAEGLS 1714
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 0.30
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 56 PGAVPAASSLFRSLVRPPTGSQSVPATAPMETQNQDAARSPGEVPKDPGKMFVG 217
PGA PA + + T + + T P TQN A P +V + K G
Sbjct: 651 PGA-PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQVDEVDDKELSG 703
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 98 VRPPTGSQSVPATAPMET 151
+ PP S S+PAT T
Sbjct: 94 LHPPASSTSLPATITTTT 111
Score = 20.2 bits (40), Expect = 3.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 64 RPRRVIAIS*SSAPADR 114
RP RV + S +P+DR
Sbjct: 1368 RPERVPTVDLSPSPSDR 1384
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 108 PWVPMRGQVPGSRHIGPLTPFPPRF 132
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 356 PWVPMRGQVPGSRHIGPLTPFPPRF 380
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 341 PWVPMRGQVPGSRHIGPLTPFPPRF 365
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 0.69
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -2
Query: 194 PWAPLRGYGPHPGFGSPWGLSPARF 120
PW P+RG P P P RF
Sbjct: 357 PWVPMRGQVPGSRHIGPLTPFPPRF 381
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 19.4 bits (38), Expect = 6.4
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -1
Query: 138 AVAGTLCE 115
A+AGT+CE
Sbjct: 407 AIAGTICE 414
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 6.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 173 YGPHPGFGSPWGLSPARFASRSAGALD 93
Y P S L+P RF SR+A D
Sbjct: 392 YHPSTQEDSEEHLTPKRFHSRAASKED 418
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 6.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 173 YGPHPGFGSPWGLSPARFASRSAGALD 93
Y P S L+P RF SR+A D
Sbjct: 392 YHPSTQEDSEEHLTPKRFHSRAASKED 418
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 19.4 bits (38), Expect = 6.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 191 WAPLRGYGPHPGFGSPWG 138
W P + H G GSP G
Sbjct: 132 WVPQKYRLRHKGDGSPGG 149
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 19.4 bits (38), Expect = 6.4
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -2
Query: 191 WAPLRGYGPHPGFGSPWG 138
W P + H G GSP G
Sbjct: 132 WVPQKYRLRHKGDGSPGG 149
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.0 bits (37), Expect = 8.5
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 60 PGVTRRTTDPRRIP 19
PG R DP+++P
Sbjct: 300 PGYFRAEKDPKKMP 313
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 19.0 bits (37), Expect = 8.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 199 GVLGHLSGATGRILVLG 149
G+LG + G G + V+G
Sbjct: 19 GILGFVIGMLGFVSVMG 35
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,109
Number of Sequences: 438
Number of extensions: 964
Number of successful extensions: 30
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4024224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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