Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_D05
         (333 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82083-1|CAB04967.1|  128|Caenorhabditis elegans Hypothetical pr...   100   3e-22
U23172-2|AAM22069.2|  538|Caenorhabditis elegans Ubiquitin prote...   100   3e-22
U23172-1|AAC46525.1|  838|Caenorhabditis elegans Ubiquitin prote...   100   3e-22
M23433-1|AAA28154.1|  838|Caenorhabditis elegans polyubiquitin p...   100   3e-22
L31492-1|AAC37252.1|  128|Caenorhabditis elegans ubiquitin/ribos...   100   3e-22
Z78420-1|CAB01708.1|   77|Caenorhabditis elegans Hypothetical pr...    63   5e-11
AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical ...    60   4e-10
U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical pr...    44   2e-05
L16530-1|AAA28161.1|  163|Caenorhabditis elegans ubiquitin-like:...    43   5e-05
AC006651-4|AAF39865.1|  163|Caenorhabditis elegans Ubiquitin-lik...    43   5e-05
M21321-1|AAA28153.1|   37|Caenorhabditis elegans protein ( C.ele...    39   8e-04
U80452-8|AAB37855.1|  244|Caenorhabditis elegans Hypothetical pr...    36   0.007
U80452-10|AAB37853.1|  214|Caenorhabditis elegans Hypothetical p...    33   0.038
U80452-7|AAB37856.1|  233|Caenorhabditis elegans Hypothetical pr...    33   0.038
U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical pr...    33   0.066
AL023844-10|CAA19530.3|  503|Caenorhabditis elegans Hypothetical...    31   0.20 
AL023844-9|CAH04760.1|  512|Caenorhabditis elegans Hypothetical ...    31   0.20 
U09415-1|AAA82164.1|  655|Caenorhabditis elegans Ceprp21 protein.      29   0.61 
AF106576-5|AAC78179.1|  655|Caenorhabditis elegans Yeast prp (sp...    29   0.61 
AC006651-5|AAM48542.1|   47|Caenorhabditis elegans Ubiquitin-lik...    29   0.61 
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ...    28   1.9  
AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical...    28   1.9  
AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical...    28   1.9  
Z78415-6|CAH60758.1|  291|Caenorhabditis elegans Hypothetical pr...    27   2.5  
AF040645-9|AAB94972.2|  197|Caenorhabditis elegans Hypothetical ...    27   3.3  
Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical pr...    26   5.7  
AF000262-7|AAN60523.1|  544|Caenorhabditis elegans Hypothetical ...    26   5.7  
Z69787-5|CAA93641.1|  129|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p...    25   10.0 

>Z82083-1|CAB04967.1|  128|Caenorhabditis elegans Hypothetical
           protein ZK1010.1 protein.
          Length = 128

 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 61  IQKESTL 67


>U23172-2|AAM22069.2|  538|Caenorhabditis elegans Ubiquitin protein
           1, isoform c protein.
          Length = 538

 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 61  IQKESTL 67



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 137 IQKESTL 143



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 213 IQKESTL 219



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 289 IQKESTL 295



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 365 IQKESTL 371



 Score = 99.5 bits (237), Expect = 5e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 441 IQKESTL 447



 Score = 60.1 bits (139), Expect = 4e-10
 Identities = 31/47 (65%), Positives = 32/47 (68%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAG 272
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503


>U23172-1|AAC46525.1|  838|Caenorhabditis elegans Ubiquitin protein
           1, isoform a protein.
          Length = 838

 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 61  IQKESTL 67



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 137 IQKESTL 143



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 213 IQKESTL 219



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 289 IQKESTL 295



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 365 IQKESTL 371



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 517 IQKESTL 523



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 593 IQKESTL 599



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 669 IQKESTL 675



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 745 IQKESTL 751



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 821 IQKESTL 827



 Score = 99.5 bits (237), Expect = 5e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 441 IQKESTL 447


>M23433-1|AAA28154.1|  838|Caenorhabditis elegans polyubiquitin
           protein.
          Length = 838

 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 61  IQKESTL 67



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 137 IQKESTL 143



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 213 IQKESTL 219



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 289 IQKESTL 295



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 365 IQKESTL 371



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 441 IQKESTL 447



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 517 IQKESTL 523



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 593 IQKESTL 599



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 669 IQKESTL 675



 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 745 IQKESTL 751



 Score = 99.1 bits (236), Expect = 7e-22
 Identities = 50/67 (74%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820

Query: 312 IQKESTL 332
           IQK+STL
Sbjct: 821 IQKQSTL 827


>L31492-1|AAC37252.1|  128|Caenorhabditis elegans
           ubiquitin/ribosomal fusion protein protein.
          Length = 128

 Score =  100 bits (239), Expect = 3e-22
 Identities = 51/67 (76%), Positives = 52/67 (77%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 311
           MQ   K L G+          TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 312 IQKESTL 332
           IQKESTL
Sbjct: 61  IQKESTL 67


>Z78420-1|CAB01708.1|   77|Caenorhabditis elegans Hypothetical
           protein F45H11.2 protein.
          Length = 77

 Score = 62.9 bits (146), Expect = 5e-11
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = +3

Query: 147 KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 326
           K L G+       P   +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY +   S
Sbjct: 6   KTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGS 65

Query: 327 TL 332
            L
Sbjct: 66  VL 67



 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 137 IFVKTLTGKTITLEVEPS 190
           I VKTLTGK I L++EP+
Sbjct: 3   IKVKTLTGKEIELDIEPN 20


>AF040645-8|AAB94982.1|  292|Caenorhabditis elegans Hypothetical
           protein F52C6.4 protein.
          Length = 292

 Score = 60.1 bits (139), Expect = 4e-10
 Identities = 29/62 (46%), Positives = 38/62 (61%)
 Frame = +3

Query: 147 KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 326
           K L G+  P       T+E +K K+Q+K G+PPDQQRLIF   QLE+ R L  YNI+ E 
Sbjct: 166 KTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDED 225

Query: 327 TL 332
            +
Sbjct: 226 II 227



 Score = 27.5 bits (58), Expect = 2.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 198 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           I+++  K+ + +  P     ++      +D RT+SDYNI+  STL
Sbjct: 111 IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151


>U80452-4|AAB37860.1|  226|Caenorhabditis elegans Hypothetical
           protein C16C8.4 protein.
          Length = 226

 Score = 44.4 bits (100), Expect = 2e-05
 Identities = 20/46 (43%), Positives = 30/46 (65%)
 Frame = +3

Query: 195 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           T+ ++K  I+ +  IP     L F+GK+LED  ++ DYNIQK ST+
Sbjct: 174 TVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219


>L16530-1|AAA28161.1|  163|Caenorhabditis elegans
           ubiquitin-like:ribosomal proteinfusion protein protein.
          Length = 163

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = +3

Query: 204 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           ++K KI+  EGIP ++QRL +AG+QLED    SD  I  E+T+
Sbjct: 23  SIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATI 61


>AC006651-4|AAF39865.1|  163|Caenorhabditis elegans Ubiquitin-like
           family protein 1,isoform a protein.
          Length = 163

 Score = 43.2 bits (97), Expect = 5e-05
 Identities = 21/43 (48%), Positives = 30/43 (69%)
 Frame = +3

Query: 204 NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           ++K KI+  EGIP ++QRL +AG+QLED    SD  I  E+T+
Sbjct: 23  SIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATI 61


>M21321-1|AAA28153.1|   37|Caenorhabditis elegans protein (
           C.elegans ubiquitin A(UbiA) gene, 5' end. ).
          Length = 37

 Score = 39.1 bits (87), Expect = 8e-04
 Identities = 21/37 (56%), Positives = 22/37 (59%)
 Frame = +3

Query: 132 MQFL*KPLRGRPSP*RSNPLXTIENVKAKIQDKEGIP 242
           MQ   K L G+          TIENVKAKIQDKEGIP
Sbjct: 1   MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37


>U80452-8|AAB37855.1|  244|Caenorhabditis elegans Hypothetical
           protein C16C8.13 protein.
          Length = 244

 Score = 35.9 bits (79), Expect = 0.007
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +3

Query: 195 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           TI  VK  I     +     R++   K LED  TL+ YNIQ+ STL
Sbjct: 194 TIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239


>U80452-10|AAB37853.1|  214|Caenorhabditis elegans Hypothetical
           protein C16C8.11 protein.
          Length = 214

 Score = 33.5 bits (73), Expect = 0.038
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 180 SNPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 308
           +N + ++E +K KI+ + GIP  +  L   GK L D + L+DY
Sbjct: 159 ANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201


>U80452-7|AAB37856.1|  233|Caenorhabditis elegans Hypothetical
           protein C16C8.14 protein.
          Length = 233

 Score = 33.5 bits (73), Expect = 0.038
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 195 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           TI  +K +I    GI     R     K LED  TL+ YNI++ ST+
Sbjct: 183 TIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228


>U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical
           protein C16C8.16 protein.
          Length = 592

 Score = 32.7 bits (71), Expect = 0.066
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 195 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 320
           TI ++K +I     +     R++  GK LED  +L+ YNIQ+
Sbjct: 217 TIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258


>AL023844-10|CAA19530.3|  503|Caenorhabditis elegans Hypothetical
           protein Y48A6B.6a protein.
          Length = 503

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 50  SPGLQEFGEALK*HFLPCGMVSRKVINDAIFVKTL 154
           S GLQ FG+ LK  F   GM++  V+   IF  TL
Sbjct: 367 SSGLQMFGKTLKASFRQLGMMAMVVMTGVIFFSTL 401


>AL023844-9|CAH04760.1|  512|Caenorhabditis elegans Hypothetical
           protein Y48A6B.6b protein.
          Length = 512

 Score = 31.1 bits (67), Expect = 0.20
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 50  SPGLQEFGEALK*HFLPCGMVSRKVINDAIFVKTL 154
           S GLQ FG+ LK  F   GM++  V+   IF  TL
Sbjct: 403 SSGLQMFGKTLKASFRQLGMMAMVVMTGVIFFSTL 437


>U09415-1|AAA82164.1|  655|Caenorhabditis elegans Ceprp21 protein.
          Length = 655

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 198 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           +  +K +IQD+ G+P  +Q+L+  G  ++D  + + YN+   + +
Sbjct: 599 MSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643


>AF106576-5|AAC78179.1|  655|Caenorhabditis elegans Yeast prp
           (splicing factor) relatedprotein 21 protein.
          Length = 655

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 198 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 332
           +  +K +IQD+ G+P  +Q+L+  G  ++D  + + YN+   + +
Sbjct: 599 MSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643


>AC006651-5|AAM48542.1|   47|Caenorhabditis elegans Ubiquitin-like
           family protein 1,isoform b protein.
          Length = 47

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 204 NVKAKIQDKEGIPPDQQRLIFAGK 275
           ++K KI+  EGIP ++QRL +A +
Sbjct: 23  SIKQKIEAAEGIPAEEQRLCYAAR 46


>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
            protein R10F2.1 protein.
          Length = 2779

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -1

Query: 150  VFTKIASLITLRDTMPHGRK 91
            VFT +A  ++L+D+M HG+K
Sbjct: 2229 VFTSVAYYLSLKDSMAHGQK 2248


>AC024859-11|AAK29981.1|  933|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15a protein.
          Length = 933

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 167 ITLEVEPSXYYRKCESQDSR*GGHPS*STKI 259
           + + ++P  + R  +SQ SR G HPS +T +
Sbjct: 209 VKVRIDPVDHQRPIDSQPSRFGQHPSRATSV 239


>AC024859-10|ABA00158.1|  832|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.15b protein.
          Length = 832

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 167 ITLEVEPSXYYRKCESQDSR*GGHPS*STKI 259
           + + ++P  + R  +SQ SR G HPS +T +
Sbjct: 108 VKVRIDPVDHQRPIDSQPSRFGQHPSRATSV 138


>Z78415-6|CAH60758.1|  291|Caenorhabditis elegans Hypothetical
           protein C17G1.8 protein.
          Length = 291

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 246 QEGCPPYLESWLSHFR*YXEGSTSRVMVFPVRVFTKIASLITLR 115
           Q+GC P    WL H        TS  ++F V +   I SL+ LR
Sbjct: 198 QKGCFPKFSDWLYHHIILVNWVTS--ILFVVEILLLILSLVVLR 239


>AF040645-9|AAB94972.2|  197|Caenorhabditis elegans Hypothetical
           protein F52C6.3 protein.
          Length = 197

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +2

Query: 137 IFVKTLTGKTITLEV 181
           +FVKT TGKTIT+ +
Sbjct: 183 VFVKTYTGKTITISI 197


>Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical
           protein K08E3.7 protein.
          Length = 386

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 183 NPLXTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 314
           N    IE++   ++    IP D+  ++F GK+L     + D ++
Sbjct: 25  NITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSL 68


>Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical
           protein C18D11.9 protein.
          Length = 111

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 17  WSYGWRRSKYGSPGL 61
           W +GWRR  YG  G+
Sbjct: 76  WGWGWRRPYYGGYGM 90


>AF000262-7|AAN60523.1|  544|Caenorhabditis elegans Hypothetical
           protein C48E7.2 protein.
          Length = 544

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 320 LLDIVIREG---STIFQLFTGEDQSLLIRRDALLILNLGFHIF 201
           +++ +++E    ST+F    G+  + LIR+    ++N GF  F
Sbjct: 26  VMETILKESCQLSTLFYKLKGQISNTLIRKSVSTLINFGFVTF 68


>Z69787-5|CAA93641.1|  129|Caenorhabditis elegans Hypothetical
           protein C44C10.6 protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 171 VMVFPVRVFTKIASLITLRDTMPH-GRKCYFKASPNSCSPGDPYLERRHP 25
           V +F  +VF ++A++ + +  +     KC+FK++      G+ +   R P
Sbjct: 73  VSMFLTKVFRRVAAIESKKCIVGEPSSKCFFKSTDEHAFTGNRFTRNRTP 122


>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
           protein C28H8.3 protein.
          Length = 1714

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 314 DIVIREGSTIFQLFTGEDQSLLIRRDALLIL 222
           +I +REG TIF    G D+   +RR+A + L
Sbjct: 672 EIAVREGRTIFDQHQGTDKQ-EVRRNAAIDL 701


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,303,100
Number of Sequences: 27780
Number of extensions: 164826
Number of successful extensions: 465
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)