Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D04
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 162 4e-40
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 162 4e-40
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 162 4e-40
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 162 4e-40
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 162 4e-40
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 162 4e-40
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 162 4e-40
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 162 4e-40
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 160 2e-39
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 143 2e-34
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 95 6e-20
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 95 6e-20
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 91 2e-18
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 48 2e-05
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 41 0.002
BC030553-1|AAH30553.1| 470|Homo sapiens sphingosine kinase 1 pr... 32 0.88
BC014439-1|AAH14439.1| 470|Homo sapiens sphingosine kinase 1 pr... 32 0.88
AK000857-1|BAA91400.1| 180|Homo sapiens protein ( Homo sapiens ... 31 1.5
BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembr... 31 2.0
BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein. 31 2.0
AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens ... 31 2.0
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 31 2.0
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 31 2.0
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 31 2.0
X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein. 29 6.2
X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for ... 29 6.2
M19828-1|AAB00481.1| 4563|Homo sapiens protein ( Human apolipopr... 29 6.2
M17367-1|AAA51741.1| 728|Homo sapiens APOB protein. 29 6.2
M15421-1|AAA51758.1| 3262|Homo sapiens APOB protein. 29 6.2
J02610-1|AAA35549.1| 4563|Homo sapiens protein ( Human apolipopr... 29 6.2
AY324608-1|AAP72970.1| 4563|Homo sapiens apolipoprotein B (inclu... 29 6.2
AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like (e... 29 6.2
AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like (e... 29 6.2
AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like (e... 29 6.2
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 29 6.2
AC010872-1|AAX88848.1| 3929|Homo sapiens unknown protein. 29 6.2
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 29 6.2
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 29 6.2
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 162 bits (394), Expect = 4e-40
Identities = 87/127 (68%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 156
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 157 GRGRGQP 163
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 160 bits (388), Expect = 2e-39
Identities = 86/127 (67%), Positives = 95/127 (74%), Gaps = 6/127 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R
Sbjct: 49 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-R 107
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGF 354
ET R +G G RP R DR YRR A P GA DKKA+ G GSA + +FRGGF
Sbjct: 108 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGF 165
Query: 355 GRGRSAP 375
GRGR P
Sbjct: 166 GRGRGQP 172
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 143 bits (346), Expect = 2e-34
Identities = 79/116 (68%), Positives = 87/116 (75%), Gaps = 5/116 (4%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R
Sbjct: 40 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-R 98
Query: 193 TETVR---RGAVG-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSADVEFR 345
ET R +G G RP R DR YRR A P GA DKKA+ G GSA EF+
Sbjct: 99 PETGRPRPKGLEGERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSA-TEFQ 151
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 95.5 bits (227), Expect = 6e-20
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+ NLQV++AM SL++RG V+E FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R R
Sbjct: 43 VTNLQVMRAMASLRARGLVRETFAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRR 102
Query: 193 TETVRRGAVGRPDAPARTAEDRSAYRRAP 279
+ A P A S +R P
Sbjct: 103 PVAMVMPARRTPHVQAVQGPLGSPPKRGP 131
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 95.5 bits (227), Expect = 6e-20
Identities = 40/46 (86%), Positives = 44/46 (95%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHL 150
+PNL V+KAMQSLKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHL
Sbjct: 33 VPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHL 78
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 90.6 bits (215), Expect = 2e-18
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = +1
Query: 13 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 192
+ NLQV++AM SL++RG V+E FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R R
Sbjct: 43 VTNLQVMRAMASLRARGLVRETFAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQRVRR 102
Query: 193 TETVRRGAVGRPDAPARTAEDRSAYRRAP 279
+ A P A S +R P
Sbjct: 103 PVAMVMPARRTPHVQAVQGPLGSPPKRGP 131
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 47.6 bits (108), Expect = 2e-05
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 223 RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 375
RP R DR YRR A P GA DKKA+ G G + +FRGGFGRGR P
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA--DKKAEAGLGQQPEFQFRGGFGRGRGQP 57
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 16 PNLQVIKAMQSLKSRGYVKE 75
PNL+V+KAMQSLKSRGYVKE
Sbjct: 41 PNLRVMKAMQSLKSRGYVKE 60
>BC030553-1|AAH30553.1| 470|Homo sapiens sphingosine kinase 1
protein.
Length = 470
Score = 31.9 bits (69), Expect = 0.88
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 226 PDAPARTAEDRSAYRRAPPAGA--PHDKKADVGPGSADVEFRGGFGRGRSAP 375
P PA D A P G PH + D GS D E + G SAP
Sbjct: 20 PRGPAAAGNDAGAPTATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP 71
>BC014439-1|AAH14439.1| 470|Homo sapiens sphingosine kinase 1
protein.
Length = 470
Score = 31.9 bits (69), Expect = 0.88
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +1
Query: 226 PDAPARTAEDRSAYRRAPPAGA--PHDKKADVGPGSADVEFRGGFGRGRSAP 375
P PA D A P G PH + D GS D E + G SAP
Sbjct: 20 PRGPAAAGNDAGAPTATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP 71
>AK000857-1|BAA91400.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ20850 fis, clone ADKA01542. ).
Length = 180
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 211 GAVGRPDAPARTAEDRSAYR-RAPPAGAPHDKKADVGPGSADVEFRGGFGRGR 366
G G R ++ +A R RA PAGA D GP + D + R G GR
Sbjct: 117 GGAGGGSRAGRASQAAAARRPRAQPAGAGADAAGHGGPAAVDGDARAGGAGGR 169
>BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembrane
protein 3 protein.
Length = 981
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 151 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 291
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 453
>BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein.
Length = 597
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 151 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 291
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 23 PPVKAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 69
>AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens
cDNA FLJ33674 fis, clone BRAWH2002047. ).
Length = 667
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 151 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 291
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 453
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 374 GADRPLPKPPLNSTSAEPGPT 312
GA+ PLP PP T+A P PT
Sbjct: 1530 GAEAPLPVPPPTGTAAAPAPT 1550
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 374 GADRPLPKPPLNSTSAEPGPT 312
GA+ PLP PP T+A P PT
Sbjct: 1375 GAEAPLPVPPPTGTAAAPAPT 1395
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 374 GADRPLPKPPLNSTSAEPGPT 312
GA+ PLP PP T+A P PT
Sbjct: 1373 GAEAPLPVPPPTGTAAAPAPT 1393
>X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein.
Length = 4560
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1830 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1867
>X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for
apolipoprotein B-100. ).
Length = 4563
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>M19828-1|AAB00481.1| 4563|Homo sapiens protein ( Human apolipoprotein
B-100 (apoB) gene, exons 22 through 29. ).
Length = 4563
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>M17367-1|AAA51741.1| 728|Homo sapiens APOB protein.
Length = 728
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 163 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 200
>M15421-1|AAA51758.1| 3262|Homo sapiens APOB protein.
Length = 3262
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 552 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 589
>J02610-1|AAA35549.1| 4563|Homo sapiens protein ( Human apolipoprotein
B-100 mRNA, complete cds. ).
Length = 4563
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>AY324608-1|AAP72970.1| 4563|Homo sapiens apolipoprotein B (including
Ag(x) antigen) protein.
Length = 4563
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 148 LPPEIVPATLKRSVRTETVRRGAVGRPDAPAR-TAEDRSAYRRAPPAGAPHDKKADVG-P 321
LPP+ VPAT R+ T+ GA P PA RS PP P K G P
Sbjct: 219 LPPKNVPATPPRTGSPLTIGPGA-SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKP 277
Query: 322 GSADV 336
G DV
Sbjct: 278 GVGDV 282
>AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 148 LPPEIVPATLKRSVRTETVRRGAVGRPDAPAR-TAEDRSAYRRAPPAGAPHDKKADVG-P 321
LPP+ VPAT R+ T+ GA P PA RS PP P K G P
Sbjct: 219 LPPKNVPATPPRTGSPLTIGPGA-SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKP 277
Query: 322 GSADV 336
G DV
Sbjct: 278 GVGDV 282
>AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.2
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 148 LPPEIVPATLKRSVRTETVRRGAVGRPDAPAR-TAEDRSAYRRAPPAGAPHDKKADVG-P 321
LPP+ VPAT R+ T+ GA P PA RS PP P K G P
Sbjct: 219 LPPKNVPATPPRTGSPLTIGPGA-SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKP 277
Query: 322 GSADV 336
G DV
Sbjct: 278 GVGDV 282
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 362 PLPKPPLNSTSAEPGPTSAFLSXXXXXXXXXXXADLSSAVRAGASG 225
P+P PP + + P TSA LS ++A A ASG
Sbjct: 393 PVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASG 438
>AC010872-1|AAX88848.1| 3929|Homo sapiens unknown protein.
Length = 3929
Score = 29.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 214 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 101
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 362 PLPKPPLNSTSAEPGPTSAFLSXXXXXXXXXXXADLSSAVRAGASG 225
P+P PP + + P TSA LS ++A A ASG
Sbjct: 393 PVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASG 438
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 362 PLPKPPLNSTSAEPGPTSAFLSXXXXXXXXXXXADLSSAVRAGASG 225
P+P PP + + P TSA LS ++A A ASG
Sbjct: 356 PVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASG 401
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,030,815
Number of Sequences: 237096
Number of extensions: 1071452
Number of successful extensions: 3887
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3863
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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