Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_D02
(423 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 212 9e-56
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 211 2e-55
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 210 3e-55
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 210 3e-55
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 210 3e-55
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 210 3e-55
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 210 3e-55
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 210 5e-55
12_02_1282 + 27528159-27529148,27529549-27529614 209 8e-55
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 209 8e-55
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 96 1e-20
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 75 2e-14
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 67 5e-12
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 57 5e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 57 7e-09
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 47 7e-06
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 44 5e-05
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 37 0.008
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 36 0.018
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 32 0.17
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 29 1.2
06_03_0013 - 15393830-15394060,15394238-15394672 28 2.7
05_05_0357 + 24377989-24378039,24378601-24378632,24378724-243788... 28 3.6
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 27 4.7
12_01_0843 + 7891622-7892524 27 4.7
02_05_0477 - 29339649-29340253,29340880-29341492 27 4.7
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 6.2
04_04_0692 - 27307349-27307728,27308381-27308546 27 8.2
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 212 bits (518), Expect = 9e-56
Identities = 94/107 (87%), Positives = 100/107 (93%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 280
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 61 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 107
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 211 bits (516), Expect = 2e-55
Identities = 93/107 (86%), Positives = 100/107 (93%)
Frame = +2
Query: 101 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 280
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
+KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+HPVLLT
Sbjct: 61 AKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLT 107
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 210 bits (514), Expect = 3e-55
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 210 bits (514), Expect = 3e-55
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 210 bits (514), Expect = 3e-55
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 210 bits (514), Expect = 3e-55
Identities = 94/104 (90%), Positives = 99/104 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 210 bits (513), Expect = 3e-55
Identities = 93/104 (89%), Positives = 99/104 (95%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 210 bits (512), Expect = 5e-55
Identities = 93/104 (89%), Positives = 98/104 (94%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLT
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 209 bits (510), Expect = 8e-55
Identities = 93/104 (89%), Positives = 98/104 (94%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 209 bits (510), Expect = 8e-55
Identities = 93/104 (89%), Positives = 98/104 (94%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 289
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 290 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP LLT
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLT 108
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 95.9 bits (228), Expect = 1e-20
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 298
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 299 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
+ YP+ +GIV +WDDM IW H FY+EL+V P E +LLT
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLT 107
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 74.9 bits (176), Expect = 2e-14
Identities = 45/118 (38%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH---QGVMVG------------MGQKD 256
A+V+DNG+G K GF+G+ P P++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 257 SYVGDEAQS---KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 67.3 bits (157), Expect = 5e-12
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 19/119 (15%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRH---QGVMVG------MGQK 253
A+V+DNG+G K GFAG+ P + P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 254 DSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+H LLT
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLT 126
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 57.2 bits (132), Expect = 5e-09
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR---GI 295
+V+DNG G+ KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP--------PGSKKWLVADQLQAQDVDVTG 59
Query: 296 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 418
+TL+ PI+ G + N + ++W N L+V P +LL
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLL 100
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 56.8 bits (131), Expect = 7e-09
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 260 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 418
YVG E + +R + + P++ G VT+WD ++ IW+H F L + PEEHP+L+
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLI 172
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 205
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 46.8 bits (106), Expect = 7e-06
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +2
Query: 125 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG---VMVGMGQKDSYVGDEAQSKRGI 295
+V+DNG+ + G+AG+ PR F +IV RPRH+ + +G D + R
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRSSGETVTVVGDTDPALMKYFDCTRS- 80
Query: 296 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
++ P + +V ++ ME I F + HP+L+T
Sbjct: 81 -AIRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMT 121
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 44.0 bits (99), Expect = 5e-05
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 311 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 418
P++ G +WD ++ IW+H F L + PEEHP+L+
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLI 127
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 36.7 bits (81), Expect = 0.008
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 122 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 298
A+VVD GS + KAG A D +P V PS + + +D +GD A + +
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV- 51
Query: 299 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 385
P+ G V +WD ME + ++ Y+ +
Sbjct: 52 ---QPVVRGFVKDWDAMEDLLNYVLYSNI 77
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 35.5 bits (78), Expect = 0.018
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 418
++R + + P++ G +WD ++ IW+H F PEEHP+L+
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLI 204
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 281 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 418
++R + + P++ G +WD ++ IW+H F EEHP+L+
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLI 105
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = -3
Query: 370 GVMPDLLHIVPVGDDAVFDG 311
G++ DL+++ VGDDA++DG
Sbjct: 405 GLIRDLIYVGAVGDDAIYDG 424
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 210 GDLVTRASWSAWVRRTPT*VMRHRAR 287
G + R +W+AW RRTP V H R
Sbjct: 163 GTVAKRRAWAAWTRRTPN-VWNHDYR 187
>05_05_0357 +
24377989-24378039,24378601-24378632,24378724-24378818,
24379165-24379237,24379804-24379867,24380465-24380732,
24381132-24381202,24382028-24382084,24382302-24382403,
24382544-24382588,24383616-24383693,24384350-24384400,
24384475-24384556,24384883-24384956,24386093-24386144,
24386230-24386288,24386380-24386456,24386692-24386778,
24387011-24387101
Length = 502
Score = 27.9 bits (59), Expect = 3.6
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -3
Query: 364 MPDLLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADH---DALVTRSP-HDRG 197
+PD L V + A F FEC PL + + +G L+ D DAL+ P +
Sbjct: 323 LPDFLEQVSANEIASFPFSFECRKAPL-IVYVHQIGYLMCFFDEKISDALLIGLPDFEFA 381
Query: 196 KYGAGSVVSRETGFAHSGPI 137
+ + V +T SG I
Sbjct: 382 EMTVDTFVPNDTKIRSSGRI 401
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +2
Query: 242 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 421
+ + DS + D Q K + +K+P G+V + W H Y V P+ V +T
Sbjct: 387 IARNDSIIVDICQRKGSVGQIKFPSLAGVVVALLFLLPKWTHGQYKSTLVCPDCRKVSVT 446
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAV 193
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 110 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 208
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 131 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 262
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 207 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 106
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,641
Number of Sequences: 37544
Number of extensions: 285619
Number of successful extensions: 893
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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