Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C20
(462 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 56 3e-09
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.012
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 1.1
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 27 1.1
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 27 1.8
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 26 2.4
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 26 3.2
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 26 3.2
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 25 4.3
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 24 9.8
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 24 9.8
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 56.0 bits (129), Expect = 3e-09
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +1
Query: 19 ATVGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVKV 144
A I ++G++G+W GLG RIVMIGTLT QW IYD+ K+
Sbjct: 261 AAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKI 302
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.012
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVKVWL 150
G+ G++KGL P ++ + A+ + +Y+ K WL
Sbjct: 390 GFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 1.1
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
+G + G G+++G GPRI + ++L + Y+ +
Sbjct: 288 LGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYEGI 325
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.5 bits (58), Expect = 1.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
G +KG+ PR+V+ TA+ W Y+A K
Sbjct: 261 GIPSFFKGIRPRMVVAMPATAVSWAAYEAGK 291
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 26.6 bits (56), Expect = 1.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
G G+++G GP +V I L + +YD +K
Sbjct: 190 GLRGLYRGFGPSVVGIVVYRGLYFGMYDTLK 220
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -2
Query: 113 SAVRVPIITILGPRPFQTPAQPSLPIIDPTVAV 15
+A P+I + P T PSLP++D V
Sbjct: 169 AAKAAPVIHVYEPDAIVTTTDPSLPLLDSNAVV 201
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 25.8 bits (54), Expect = 3.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 311 LVTSHRLMYVH*KIRYNFCTAATYLYVLYVTFV---TSHVPLQVLL 439
++T + Y I +NF + TY +VL++ F T VP+ LL
Sbjct: 57 IITQIYVGYKTKNIGWNFFSVVTYCFVLFLQFAEQSTLRVPMASLL 102
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 3.2
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 22 TVGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
T+ SI+ G+ ++KG+ PR++ + A+ YD +
Sbjct: 298 TIKSIVAHEGFLALYKGIVPRVLWLSGGGAIFLGCYDVI 336
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.4 bits (53), Expect = 4.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 7 GDKTATVGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
G +++ +I G AG+++G+GP +M+G L + W IY V
Sbjct: 52 GGTLSSMRTIFHNEGIAGLYRGVGP--MMLGYLPS--WSIYFVV 91
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 24.2 bits (50), Expect = 9.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 341 GHT*GDVTSQDSNAATSLHDMSPPYK 264
GH TS NA+ SL+D SP K
Sbjct: 262 GHGMVQTTSDKVNASASLYDRSPSKK 287
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 24.2 bits (50), Expect = 9.8
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 98 PIITILGPRPFQTPAQPSLPIIDPTVAVLSP 6
P T + P P + P + +++PT A SP
Sbjct: 301 PARTPVTPAPLEKPVNLAPEVVEPTNAAASP 331
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,819,644
Number of Sequences: 5004
Number of extensions: 33163
Number of successful extensions: 81
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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