Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C20
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0755 + 5648872-5649471,5650092-5650453,5650576-5650619,565... 52 2e-07
04_04_0045 + 22337089-22337385,22338437-22338715,22338728-223387... 52 2e-07
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391... 52 2e-07
09_04_0372 + 17026551-17026778,17027469-17027830,17027925-170279... 49 2e-06
03_02_0454 + 8626832-8627134,8627255-8627606,8627705-8627748,862... 44 6e-05
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 38 0.005
11_08_0097 + 28330565-28330645,28330768-28330986,28331066-283311... 31 0.60
07_03_0091 + 13312904-13313647 30 0.79
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 30 0.79
11_06_0080 - 19880319-19880957,19881800-19881948,19882266-198835... 29 1.4
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 29 1.4
03_01_0534 + 3996479-3997458,3997938-3998265 29 1.4
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 29 1.8
03_02_0646 + 10141967-10142476,10143721-10144254 29 1.8
03_02_0469 + 8720119-8720199,8720295-8720372,8720496-8720570,872... 29 1.8
06_03_1448 + 30235336-30236763 29 2.4
06_03_1443 + 30182018-30183445 29 2.4
06_03_1440 + 30166515-30167942 29 2.4
06_03_1437 + 30151030-30152457 29 2.4
06_03_1429 + 30100834-30102261 29 2.4
06_03_1425 + 30084383-30085810 29 2.4
06_03_1420 - 30053713-30055140 29 2.4
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 29 2.4
03_05_1041 - 29884975-29885107,29885485-29885552,29885652-298858... 28 3.2
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 28 3.2
04_04_0575 - 26342697-26342885,26343030-26343165,26343279-263437... 28 4.2
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 27 5.6
09_04_0683 - 19431034-19431495,19431632-19431997,19432055-194323... 27 7.3
08_01_0955 + 9478018-9478773 27 7.3
06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169... 27 7.3
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 27 7.3
03_06_0002 + 30917082-30917146,30917594-30917975,30918083-309182... 27 7.3
02_02_0123 + 7015905-7015928,7015975-7016105,7017675-7017940,701... 27 7.3
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462... 27 9.7
07_03_0117 + 13589997-13590998 27 9.7
07_01_1033 + 8958317-8959254,8959438-8959673,8960440-8960486,896... 27 9.7
06_03_1446 - 30220158-30220278,30220866-30222229 27 9.7
06_03_1434 - 30139990-30140110,30140698-30142061 27 9.7
06_03_1415 + 30013398-30014548,30021401-30021552,30022596-30022624 27 9.7
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 27 9.7
05_07_0006 - 27001038-27001600,27001713-27001980 27 9.7
>06_01_0755 +
5648872-5649471,5650092-5650453,5650576-5650619,
5651324-5651538,5651643-5651767,5651862-5651931
Length = 471
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 KTATVGSIIGKLG-WAGVWKGLGPRIVMIGTLTALQWFIYDAVKV 144
K ATVG + KLG W +GL RIVMIGTLT QW IYDA KV
Sbjct: 401 KGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKV 445
>04_04_0045 +
22337089-22337385,22338437-22338715,22338728-22338798,
22338883-22338926,22340670-22340884,22340958-22341082,
22341142-22341220,22341278-22341367
Length = 399
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/45 (60%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVW-KGLGPRIVMIGTLTALQWFIYDAVKV 144
K ATVG + KLG G++ +GL RIVMIGTLT QW +YDA KV
Sbjct: 296 KGATVGDAVNKLGMWGLFTRGLPLRIVMIGTLTGAQWGLYDAFKV 340
>02_05_0867 -
32338313-32338331,32338372-32338496,32338972-32339186,
32340043-32340086,32340187-32340548,32341357-32341650
Length = 352
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/45 (62%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 KTATVGSIIGKLG-WAGVWKGLGPRIVMIGTLTALQWFIYDAVKV 144
K ATVG + KLG W +GL RIVMIGTLT QW IYDA KV
Sbjct: 299 KGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKV 343
>09_04_0372 +
17026551-17026778,17027469-17027830,17027925-17027968,
17028079-17028293,17028405-17028529,17028617-17028692
Length = 349
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/45 (55%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 KTATVGSIIGKLG-WAGVWKGLGPRIVMIGTLTALQWFIYDAVKV 144
K ATVG + LG W +GL RI+MIGTLT QW IYD+ KV
Sbjct: 277 KGATVGDAVKNLGLWGLFTRGLPLRILMIGTLTGTQWVIYDSFKV 321
>03_02_0454 +
8626832-8627134,8627255-8627606,8627705-8627748,
8629014-8629035,8629136-8629350,8629468-8629592,
8629681-8629756
Length = 378
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 13 KTATVGSIIGKLG-WAGVWKGLGPRIVMIGTLTALQWFIYDAVKVWL 150
K T+ + LG W + +GL RI+M+GTLT QW YDA KV++
Sbjct: 306 KGGTMADAVRTLGVWGLLTRGLPLRIIMVGTLTGAQWATYDAFKVFV 352
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 13 KTATVG---SIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
+T+T+G I+ + G +WKG+GP + G LTA Q YD K
Sbjct: 757 RTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEAK 802
>11_08_0097 +
28330565-28330645,28330768-28330986,28331066-28331144,
28331222-28331355,28331447-28331545,28331638-28331742,
28332377-28332451,28333671-28333757,28333854-28333889
Length = 304
Score = 30.7 bits (66), Expect = 0.60
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 34 IIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
I+ + G+A +W G+GP + + A + YD VK
Sbjct: 168 IVRQEGFAALWTGIGPNVARNAIINAAELASYDQVK 203
>07_03_0091 + 13312904-13313647
Length = 247
Score = 30.3 bits (65), Expect = 0.79
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 77 PRPFQTPAQPSLPIIDPTVAVLSP 6
P+P P+QP LP + P +A++ P
Sbjct: 222 PKPQPEPSQPKLPPLSPAIAIIVP 245
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 30.3 bits (65), Expect = 0.79
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 34 IIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVKVWL 150
I+ K G+ G++KGL P +V A+ + Y+ + W+
Sbjct: 298 IVAKEGFGGLYKGLFPSLVKSAPAGAVTFVAYEYISDWI 336
>11_06_0080 -
19880319-19880957,19881800-19881948,19882266-19883589,
19883766-19883953,19884034-19884499
Length = 921
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
K TVG G +GW +WKG+
Sbjct: 444 KVITVGGEAGTIGWVDLWKGI 464
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 31 SIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
+II + G+AG+ +G PR++ A+ W Y+A K
Sbjct: 317 TIIKRDGYAGLMRGWKPRMLFHAPAAAICWSTYEASK 353
>03_01_0534 + 3996479-3997458,3997938-3998265
Length = 435
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 1 ARGDKTATVGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
AR +TV ++ + GWA ++GLGPR + A Y+ +K
Sbjct: 274 ARPTLKSTVRGLLKEGGWAACYRGLGPRWGSMSLSAATMVTTYEFLK 320
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVKVWL 150
G G++KGLGP + AL + +Y+A+K +L
Sbjct: 463 GVGGLFKGLGPTLAREVPGNALMFGVYEAIKQYL 496
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
+ +I + G +WKGL PR++ I A+ W + D V
Sbjct: 296 IRTIYTEEGLRALWKGLLPRLMRIPPGQAIMWAVADQV 333
>03_02_0469 +
8720119-8720199,8720295-8720372,8720496-8720570,
8720666-8720796,8720948-8721002,8721107-8721217,
8721538-8721606,8721687-8721794,8722106-8722174,
8722266-8722320,8722499-8722701
Length = 344
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
G+ G WKG+ P ++M+ A+Q+ +Y+ +
Sbjct: 186 GFLGFWKGVVPALIMVSN-PAIQFMLYETL 214
>06_03_1448 + 30235336-30236763
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>06_03_1443 + 30182018-30183445
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>06_03_1440 + 30166515-30167942
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>06_03_1437 + 30151030-30152457
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>06_03_1429 + 30100834-30102261
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>06_03_1425 + 30084383-30085810
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>06_03_1420 - 30053713-30055140
Length = 475
Score = 28.7 bits (61), Expect = 2.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT T+G G +GW +W+G+
Sbjct: 206 KTITLGGAKGTVGWVDLWRGI 226
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 28.7 bits (61), Expect = 2.4
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVKVWL 150
+GS+ + G+ +++G P ++ + L + +Y+++K WL
Sbjct: 192 LGSVYREEGFRALYRGWLPSVIGVVPYVGLNFAVYESLKDWL 233
>03_05_1041 -
29884975-29885107,29885485-29885552,29885652-29885816,
29886262-29886372,29886999-29887072,29887387-29887480,
29887750-29887849,29888075-29888151,29888856-29888935,
29889025-29889157
Length = 344
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/37 (27%), Positives = 26/37 (70%)
Frame = +1
Query: 31 SIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
+I+ + GW +++G+GP ++++ T A+Q+ Y+ ++
Sbjct: 166 TILKEEGWLALYRGIGPGLLLV-THGAIQFTAYEELR 201
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 31 SIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
+II + G +W GLGP I + A + YD +K
Sbjct: 161 TIIRQEGIGALWTGLGPNIARNAIINATELASYDQLK 197
>04_04_0575 -
26342697-26342885,26343030-26343165,26343279-26343795,
26344286-26344381,26344933-26345011,26345329-26345712
Length = 466
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +1
Query: 34 IIGKLGWAGVWKGLGP---RIVMIGTLTALQW-FIYDAVKVW 147
+I GW +W+GL P R + G + W FI+ A+ W
Sbjct: 308 VIALEGWGALWRGLRPGMTRDCVFGGMFFSTWQFIHTAMLTW 349
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
V +I G G++KGLG ++ +G A+ + +Y++++
Sbjct: 156 VSTICRDEGVKGLYKGLGATLLGVGPSIAISFTVYESLR 194
>09_04_0683 -
19431034-19431495,19431632-19431997,19432055-19432326,
19433621-19433686,19433924-19433978,19434509-19434577,
19435200-19435307,19435394-19435462,19435883-19436038,
19436089-19436229,19436514-19436568,19437103-19437233,
19437382-19437486
Length = 684
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
V + + G G WKGL P ++M+ ++Q+ IY+ +
Sbjct: 197 VREVYRESGIRGFWKGLIPTLIMVCN-PSIQFMIYETL 233
>08_01_0955 + 9478018-9478773
Length = 251
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 116 SGSSTMPSRCG*GCPGLRPR-RCPSRCASGSRPRKPPRQINQ 238
+GS+T C PR RCPSRC + P + +Q
Sbjct: 92 AGSTTTAPPAAWTCTRAAPRCRCPSRCRRAAPPPSSSKNTDQ 133
>06_03_0741 -
24016204-24016298,24016408-24016525,24016805-24016903,
24016992-24017117,24017200-24017277,24017366-24017554,
24018186-24018338,24018785-24018898,24019576-24019761,
24019845-24019970,24020053-24020248,24020338-24020438,
24020533-24020610,24020707-24020952,24021063-24022253
Length = 1031
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 170 PRRCPSRCASGSRPRKPPRQINQLHT 247
P R S A GSRPR PPR +T
Sbjct: 28 PSRGISTLAKGSRPRAPPRPAPHQYT 53
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 34 IIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVKV 144
I+GK G+ G++ G G ++ A+Q+ IY+ +++
Sbjct: 141 IVGKEGFRGLYAGYGSFLLRDLPFDAIQFCIYEQLRI 177
>03_06_0002 +
30917082-30917146,30917594-30917975,30918083-30918279,
30918372-30918513,30919287-30919415,30919460-30919471
Length = 308
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPR 84
V +I + GW G ++GLGPR
Sbjct: 274 VRRLIAEDGWKGFYRGLGPR 293
>02_02_0123 +
7015905-7015928,7015975-7016105,7017675-7017940,
7018239-7018327,7018716-7018811,7018874-7018969,
7019121-7019251,7020123-7020177,7020645-7020800,
7021238-7021306,7021392-7021499,7022128-7022196,
7022743-7022797,7023031-7023227
Length = 513
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 25 VGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAV 138
V + + G G WKGL P ++M+ ++Q+ IY+ +
Sbjct: 349 VREVYRESGIRGFWKGLIPTLIMVCN-PSIQFMIYETL 385
>08_02_0530 +
18244933-18245217,18245309-18245383,18246176-18246292,
18246503-18246631,18246726-18246785,18247271-18247441,
18247596-18247689,18247860-18247951,18248071-18248220,
18248407-18248465,18249735-18249864
Length = 453
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 22 TVGSIIGKLGWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
T+ I G G++ G+GPR+ G + Y+ VK
Sbjct: 405 TLADIWSSGGMKGLFTGVGPRVARAGPSVGIVISFYEVVK 444
>07_03_0117 + 13589997-13590998
Length = 333
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
G GV++GL P + + ++ L + +Y+A+K
Sbjct: 191 GVRGVYRGLCPSLARVLPMSGLNFCVYEALK 221
>07_01_1033 +
8958317-8959254,8959438-8959673,8960440-8960486,
8960683-8960733
Length = 423
Score = 26.6 bits (56), Expect = 9.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT +G G +GW +W+G+
Sbjct: 212 KTIVIGGERGTVGWVDLWRGI 232
>06_03_1446 - 30220158-30220278,30220866-30222229
Length = 494
Score = 26.6 bits (56), Expect = 9.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT +G G +GW +W+G+
Sbjct: 214 KTIVLGGAKGTVGWVDLWRGI 234
>06_03_1434 - 30139990-30140110,30140698-30142061
Length = 494
Score = 26.6 bits (56), Expect = 9.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT +G G +GW +W+G+
Sbjct: 214 KTIVLGGAKGTVGWVDLWRGI 234
>06_03_1415 + 30013398-30014548,30021401-30021552,30022596-30022624
Length = 443
Score = 26.6 bits (56), Expect = 9.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
KT +G G +GW +W+G+
Sbjct: 214 KTIALGGAKGTVGWVDLWRGI 234
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 49 GWAGVWKGLGPRIVMIGTLTALQWFIYDAVK 141
G G++KGLGP + + + + Y+A K
Sbjct: 378 GIGGLYKGLGPSCIKLMPAAGISFMCYEACK 408
>05_07_0006 - 27001038-27001600,27001713-27001980
Length = 276
Score = 26.6 bits (56), Expect = 9.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 13 KTATVGSIIGKLGWAGVWKGL 75
K T+G G +GW +W+G+
Sbjct: 188 KVITLGGAKGTVGWVDLWRGI 208
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,112,797
Number of Sequences: 37544
Number of extensions: 263529
Number of successful extensions: 753
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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