Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_C19
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.0  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.3  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 95  VWGRFDLME*NKIIIFSVTMLHITDT 18
           VW RF++ E   +   SV ++H  DT
Sbjct: 127 VWARFNVNEQMYLYALSVAVIHRPDT 152


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 95  VWGRFDLME*NKIIIFSVTMLHITDT 18
           VW RF++ E   +   SV ++H  DT
Sbjct: 127 VWARFNVNEQMYLYALSVAVIHRPDT 152


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 75  NGIK*NYNIQCDNVTYN*HNLE 10
           N    NYN  C  + YN  N+E
Sbjct: 341 NNYNNNYNNNCKKLYYNIINIE 362


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 312 PYHDNWFFQTRRINFSHFRGPST 380
           P H +   QT+ +   H+R P T
Sbjct: 349 PPHHHHHHQTQSLQHLHYRQPPT 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,404
Number of Sequences: 438
Number of extensions: 2696
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)