Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C18
(582 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0217 - 1644696-1645034,1645143-1645214 177 4e-45
11_01_0348 - 2607315-2607424,2608634-2609030 175 2e-44
06_01_0428 + 3055163-3055573 175 2e-44
06_01_0427 - 3054204-3054614 175 2e-44
06_01_0423 - 3039527-3039937 175 2e-44
05_04_0449 - 21355439-21355849 175 2e-44
04_03_0909 + 20748653-20749063 175 2e-44
01_06_1456 + 37507156-37507566 175 2e-44
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 163 1e-40
12_02_0048 - 12852335-12852745 137 5e-33
06_01_0425 - 3045557-3046004,3046852-3046856 136 1e-32
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 132 2e-31
12_02_0047 - 12836779-12837189 130 6e-31
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 118 3e-27
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 91 4e-19
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 75 4e-14
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 30 1.2
02_01_0611 - 4567839-4568144,4568280-4569209,4569301-4569566,456... 30 1.2
06_01_1101 - 9044679-9045320,9045484-9045890,9046020-9046274,904... 28 4.7
01_07_0198 - 41918276-41918408,41918486-41918841,41919091-419192... 28 6.2
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 27 8.2
01_01_1006 - 7972645-7973811 27 8.2
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 177 bits (432), Expect = 4e-45
Identities = 87/92 (94%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIRKLPFQRLVREIAQDFKTDLRFQS LA
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLA 92
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRG 513
CAI KRVTIMPKDIQLARRIRG
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRG 133
>06_01_0428 + 3055163-3055573
Length = 136
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>06_01_0423 - 3039527-3039937
Length = 136
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 175 bits (426), Expect = 2e-44
Identities = 84/88 (95%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQS+
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSS 88
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 163 bits (395), Expect = 1e-40
Identities = 87/106 (82%), Positives = 89/106 (83%), Gaps = 14/106 (13%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATK--------------AARKSAPSTGGVKKPHRYRPGT 223
MARTKQTARKSTGGKAPRKQLATK AARKSAP+TGGVKKPHRYRPGT
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKSDFDRWSYITISVQAARKSAPTTGGVKKPHRYRPGT 60
Query: 224 VALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
VALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS LA
Sbjct: 61 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLA 106
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 125 CAIHA-KRVTIMPKDIQLARRIRGERA 150
>12_02_0048 - 12852335-12852745
Length = 136
Score = 137 bits (332), Expect = 5e-33
Identities = 66/92 (71%), Positives = 77/92 (83%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTA+KST PRK L K ARKSAP+ G+KKPHR++PGTVALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTASNVPRKLLVMKVARKSAPTMAGLKKPHRFKPGTVALREIRTYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIRKLPFQRLV+EIAQD ++ +RFQS+ +A
Sbjct: 61 LLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVA 92
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +1
Query: 460 KRVTIMPKDIQLARRIRGERA 522
KRVTIMPKDIQLARRIRGE+A
Sbjct: 116 KRVTIMPKDIQLARRIRGEKA 136
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 136 bits (329), Expect = 1e-32
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = +2
Query: 137 RKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ 316
RKQLATKA KSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQ
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 91
Query: 317 DFKTDLRFQSA 349
DFKTDLRFQS+
Sbjct: 92 DFKTDLRFQSS 102
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 125 CAIHA-KRVTIMPKDIQLARRIRGERA 150
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 132 bits (319), Expect = 2e-31
Identities = 73/102 (71%), Positives = 78/102 (76%), Gaps = 10/102 (9%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGV----------KKPHRYRPGTVALR 235
MARTKQTARKSTGGKAPRK L AA APS+ GV KKP R+RPGTVALR
Sbjct: 66 MARTKQTARKSTGGKAPRKPLRAIAAVMPAPSSRGVARKSVPFIGVKKPRRHRPGTVALR 125
Query: 236 EIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
EIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS LA
Sbjct: 126 EIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLA 167
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGER 519
CAI KRVTIM KD+QLARRIRGER
Sbjct: 186 CAIH-SKRVTIMSKDVQLARRIRGER 210
>12_02_0047 - 12836779-12837189
Length = 136
Score = 130 bits (315), Expect = 6e-31
Identities = 63/88 (71%), Positives = 71/88 (80%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTA+KST G PRK L K ARKSAP G+KKPHR+ P VALREIR YQKSTE
Sbjct: 1 MARTKQTAKKSTAGNVPRKLLVMKVARKSAPMMAGLKKPHRFNPWIVALREIRTYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLV+EI QD ++ +RFQS+
Sbjct: 61 LLIRKLPFQRLVQEITQDIRSYVRFQSS 88
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 460 KRVTIMPKDIQLARRIRGERA 522
KRVTIMPKDIQLAR I GE+A
Sbjct: 116 KRVTIMPKDIQLARCIGGEKA 136
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 118 bits (284), Expect = 3e-27
Identities = 58/68 (85%), Positives = 61/68 (89%)
Frame = +2
Query: 158 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 337
AARKSAP GGVKKPHRYRPGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+R
Sbjct: 4 AARKSAPCIGGVKKPHRYRPGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMR 63
Query: 338 FQSALPLA 361
FQS LA
Sbjct: 64 FQSHAVLA 71
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGER 519
CAI KRVTIM KD+QLARRIRGER
Sbjct: 90 CAIH-SKRVTIMSKDVQLARRIRGER 114
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 91.5 bits (217), Expect = 4e-19
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRY P R+Q
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYPPWKRCSSTDLRFQSHAV 60
Query: 266 LLIRK 280
L +++
Sbjct: 61 LALQE 65
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 81 CAIHA-KRVTIMPKDIQLARRIRGERA 106
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGV-------KKPHRYRPGTVALREI 241
MARTK A + + + +K ++ R S A GG +KPHR+RPGTVALREI
Sbjct: 1 MARTKHPAVRKSKAEPKKKLQFERSPRPSKAQRAGGTPRQQTKQRKPHRFRPGTVALREI 60
Query: 242 RRYQKSTELLIRKLPFQRLVREIAQDFKTDL 334
R++QK+TELLI PF RLVREI + D+
Sbjct: 61 RKFQKTTELLIPFAPFSRLVREITDFYSKDV 91
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGER 519
CAI KRVTIM KD+QLARRI G R
Sbjct: 120 CAIHA-KRVTIMQKDMQLARRIGGRR 144
>05_04_0149 -
18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/94 (22%), Positives = 37/94 (39%)
Frame = -3
Query: 355 WQSRLETKIGFKVLSNFSNESLERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTG 176
W ++G + S+ +L L D+Q+R + NF+ G S +G
Sbjct: 677 WGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSG 736
Query: 175 CRFSRRFSSQLFARSFTSCRFTGCLLCTCHYSLQ 74
CR F+ + + +C C C+ SL+
Sbjct: 737 CRLP--FNLRRKRHNCYNCALVFCHACSSKKSLK 768
>02_01_0611 -
4567839-4568144,4568280-4569209,4569301-4569566,
4569662-4569970,4570497-4570647,4570958-4571012,
4571137-4571512,4571560-4571797,4571878-4572096,
4572629-4572910
Length = 1043
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 89 ARTKQTARKS-TGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP 217
AR AR+ GG+ P + LA+ A SA + GG ++P + P
Sbjct: 14 ARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAP 57
>06_01_1101 -
9044679-9045320,9045484-9045890,9046020-9046274,
9046375-9046498,9047237-9047289,9047388-9047648,
9047795-9047848,9047975-9048458,9048554-9048592
Length = 772
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 436 PFCAIPLPKRVTI-MPKDIQLARRIRGE 516
P P PKRV +PKD ++ R +RGE
Sbjct: 676 PNTTAPKPKRVRFALPKDTKIDREVRGE 703
>01_07_0198 -
41918276-41918408,41918486-41918841,41919091-41919237,
41919666-41921789,41922150-41922344,41922488-41922568,
41923325-41923414,41923507-41923593,41923914-41923961
Length = 1086
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/94 (21%), Positives = 37/94 (39%)
Frame = -3
Query: 355 WQSRLETKIGFKVLSNFSNESLERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTG 176
W ++G + + +L L D+Q+R + NF+ G S +G
Sbjct: 603 WGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSG 662
Query: 175 CRFSRRFSSQLFARSFTSCRFTGCLLCTCHYSLQ 74
CR + F+ + + +C C C+ SL+
Sbjct: 663 CR--QPFNLRRKRHNCYNCALVFCHSCSSKKSLK 694
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 104 TARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALR 235
T+ ++ G +PR++LA+ ST K HR + ALR
Sbjct: 737 TSSMASRGTSPRRRLASDGVNALLKSTDFTDKDHRPSTSSAALR 780
>01_01_1006 - 7972645-7973811
Length = 388
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 219 PGR*RWGFLTPPVLGADFRAALVANCLRGAL--PPVDLRAVCFVRA 88
PG + FL V G D RA V C A+ PP+ + FVRA
Sbjct: 333 PGEVAYFFLHSRVFGVDLRACSVLECEFFAMLNPPMRYHSSRFVRA 378
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,262,696
Number of Sequences: 37544
Number of extensions: 275815
Number of successful extensions: 755
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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