Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C18
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 179 1e-45
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 179 1e-45
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 174 3e-44
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 174 3e-44
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 174 3e-44
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 174 3e-44
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 174 3e-44
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 174 3e-44
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 174 3e-44
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 174 3e-44
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 174 3e-44
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 174 3e-44
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 163 8e-41
Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical pr... 136 8e-33
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 127 5e-30
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical pr... 61 5e-10
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 33 0.11
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 31 0.79
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 31 0.79
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF077541-10|AAM54170.2| 179|Caenorhabditis elegans Cysteinyl tr... 29 1.8
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p... 28 4.2
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p... 28 4.2
Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 7.4
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 7.4
AF016451-12|AAB65994.1| 317|Caenorhabditis elegans Hypothetical... 27 9.7
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 179 bits (436), Expect = 1e-45
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQSA
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSA 88
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKD+QLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDMQLARRIRGERA 136
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 179 bits (436), Expect = 1e-45
Identities = 87/88 (98%), Positives = 88/88 (100%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LLIRKLPFQRLVREIAQDFKTDLRFQSA
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSA 88
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 174 bits (424), Expect = 3e-44
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSALPLA 361
LLIR+ PFQRLVREIAQDFKTDLRFQS+ +A
Sbjct: 61 LLIRRAPFQRLVREIAQDFKTDLRFQSSAVMA 92
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKDIQLARRIRGERA
Sbjct: 111 CAIHA-KRVTIMPKDIQLARRIRGERA 136
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 163 bits (396), Expect = 8e-41
Identities = 81/88 (92%), Positives = 83/88 (94%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTKQTARKSTGGKAPRK LATKAARKSA TG VKK HR+RPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTE 60
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LL+RKLPFQRLVREIAQDFKTDLRFQSA
Sbjct: 61 LLLRKLPFQRLVREIAQDFKTDLRFQSA 88
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGERA 522
CAI KRVTIMPKD+QLARRIRGER+
Sbjct: 111 CAIHA-KRVTIMPKDMQLARRIRGERS 136
>Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical
protein E03A3.3 protein.
Length = 127
Score = 136 bits (330), Expect = 8e-33
Identities = 66/76 (86%), Positives = 70/76 (92%)
Frame = +2
Query: 122 GGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 301
GGKAPRKQLATKAARK+A G VKKPHR+RPGTVALREIRRYQKST+LL+RKLPFQRLV
Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLV 63
Query: 302 REIAQDFKTDLRFQSA 349
REIAQD K DLRFQSA
Sbjct: 64 REIAQDVKQDLRFQSA 79
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGER 519
CAI KRVTIMPKD+QLARRIRGER
Sbjct: 102 CAIHA-KRVTIMPKDMQLARRIRGER 126
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 127 bits (307), Expect = 5e-30
Identities = 65/88 (73%), Positives = 73/88 (82%)
Frame = +2
Query: 86 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 265
MARTK TARKS GGKAPRK LATKAARK P G VKK RYRP + AL+EIR+YQKSTE
Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTE 58
Query: 266 LLIRKLPFQRLVREIAQDFKTDLRFQSA 349
LL+RKLPFQRLVRE+AQ+ ++RFQSA
Sbjct: 59 LLVRKLPFQRLVREVAQEIMPNVRFQSA 86
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = +2
Query: 191 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ---DFKTDLRFQS 346
+ K RYRPG AL EIR+YQ+S +LLI K PF RLVREI Q F +DLR +S
Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRS 212
>U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical
protein F20D6.9 protein.
Length = 118
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +2
Query: 197 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ 343
+ + + GTVALREIR+ Q+STELLI + F+RLV+E+AQDF TDL F+
Sbjct: 20 RSYPFHSGTVALREIRKQQQSTELLIPRSRFERLVKELAQDFVTDLIFR 68
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 442 CAIPLPKRVTIMPKDIQLARRIRGE 516
CAI KRVTI +++ ARRIRGE
Sbjct: 93 CAIKC-KRVTIEADNLKFARRIRGE 116
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 60.5 bits (140), Expect = 9e-10
Identities = 32/55 (58%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Frame = +2
Query: 191 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQ---DFKTDLRFQS 346
V K RYRPG AL EIR+YQK+ +LLI+K PF RLVREI Q F D R +S
Sbjct: 185 VTKTRRYRPGQKALEEIRKYQKTEDLLIQKAPFARLVREIMQTSTPFGADCRIRS 239
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 257 IFDSDEFLEALQYQGDNDGVS*LHQYWVPI 168
+F D FL+ L QGD+D + L+ YW P+
Sbjct: 1 MFFLDAFLKGLHKQGDDDSIDRLNYYWTPM 30
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 30.7 bits (66), Expect = 0.79
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 89 ARTKQTARKSTGGK--APRKQLATKAARKSAP 178
+R++ +R ST GK AP+K + TKAAR +P
Sbjct: 94 SRSRSRSRSSTRGKKRAPKKAVTTKAARSISP 125
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 30.7 bits (66), Expect = 0.79
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 187 WS*ETPSLSPWYCSASRNSSLSKIYGVVDPQAAFPAT 297
WS +TP SP ++++SLS YGV P +FP++
Sbjct: 224 WSYDTPQTSP---RRAQSASLSPPYGVPSPSYSFPSS 257
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 218 GTVALREIRRYQKS--TELLIRKLPFQRLVREIAQDFKT 328
G + +E+++ ++ T+LL+R LPF+ V+E+ F+T
Sbjct: 732 GALKRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFET 770
>AF077541-10|AAM54170.2| 179|Caenorhabditis elegans Cysteinyl trna
synthetase protein2, isoform a protein.
Length = 179
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 319 VLSNFSNESLERQLADQQLRR--FLIATNFSKRYSTRAITMGFLNSTSTGC 173
+L ++ NESL +L + F++ + SKR+S++ I+ + TGC
Sbjct: 114 LLKSYFNESLHLNSTHSKLLQTTFIVYLHKSKRFSSKTISTYMFHQIKTGC 164
>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
protein F46F11.1b protein.
Length = 1225
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 93 VQSKQPVNLQEVKLLANNWLLKRRENRHPVLVELR 197
++ K+P L EV LA +++++ +RH +L +LR
Sbjct: 406 IKMKKPNQLMEVLELARALVIEKQRDRHQILEKLR 440
>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
protein F46F11.1a protein.
Length = 1339
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 93 VQSKQPVNLQEVKLLANNWLLKRRENRHPVLVELR 197
++ K+P L EV LA +++++ +RH +L +LR
Sbjct: 406 IKMKKPNQLMEVLELARALVIEKQRDRHQILEKLR 440
>Z81043-5|CAB02802.2| 278|Caenorhabditis elegans Hypothetical
protein C29F3.6 protein.
Length = 278
Score = 27.5 bits (58), Expect = 7.4
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = -3
Query: 337 TKIGFKVLSNFSNESLERQLADQQLRRFLIATNFSKRYSTRAITMGFLNSTSTGCRFSRR 158
T I K++SN +++ +++Q +++F T+ +R+ +A+T G L +T F R
Sbjct: 193 TLIKVKLISN----EIKKSVSEQAVQQF---TSRDRRFLAQAVTQGSLFLLATMVFFPTR 245
Query: 157 FSSQLFARSFTSCRFTGCLLCTCHYSLQ*ASK 62
FS + T C T H SLQ +K
Sbjct: 246 FSVNSWV---TFLGGNSCGRWTHHDSLQPGNK 274
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 98 KQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKP 202
++ A KST K K A KAA S+ S+ KKP
Sbjct: 319 EKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKP 353
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 98 KQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKP 202
++ A KST K K A KAA S+ S+ KKP
Sbjct: 594 EKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKP 628
>AF016451-12|AAB65994.1| 317|Caenorhabditis elegans Hypothetical
protein C03A7.13 protein.
Length = 317
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 355 WQSRLETKIGFKVLSNFSNESLERQLADQQLRRFLIATNF 236
++ R T GF+V + N E LADQ L FL + +
Sbjct: 96 FEDRPFTFNGFQVYNKIGNALCESALADQNLHAFLTSRQY 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,107,581
Number of Sequences: 27780
Number of extensions: 231728
Number of successful extensions: 630
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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