Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C17
(419 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0142 - 21107878-21109104 100 9e-22
04_01_0200 + 2400929-2402161 90 6e-19
02_03_0240 - 16739628-16740369,16740392-16740978 66 1e-11
06_03_0405 - 20464701-20466287 30 0.87
12_02_0079 + 13310066-13310652,13310737-13310954,13311099-133113... 29 1.1
05_07_0301 + 29087014-29088349,29088507-29088645,29090350-29091001 29 1.1
01_05_0127 - 18401461-18401464,18401868-18403876,18404060-184042... 29 1.5
08_02_0481 + 17636359-17636593,17638136-17638278,17638431-176385... 28 2.7
04_03_0236 - 13137616-13137743,13138224-13138311,13139056-13139118 28 2.7
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 28 3.5
07_01_0798 - 6271261-6271725 28 3.5
10_08_0261 + 16305388-16306104 27 4.6
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 27 4.6
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 27 4.6
12_01_0655 + 5546293-5546478,5546760-5546877,5550697-5550776,555... 27 6.1
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 27 6.1
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 27 6.1
10_08_0260 - 16290798-16290893,16292284-16292570,16293248-162939... 27 6.1
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 27 6.1
11_01_0224 + 1752626-1752911,1754881-1754963,1755307-1755402 27 8.1
>09_06_0142 - 21107878-21109104
Length = 408
Score = 99.5 bits (237), Expect = 9e-22
Identities = 63/145 (43%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Frame = +3
Query: 9 GGFPGSAHSSLREVSQVINTALEVHFPERS-VRVIAEPGRYFAAAAYTLATMIYAKREVV 185
GGF A + E + VIN ALE HF + V VI EPGRYFA A+TLA V+
Sbjct: 244 GGF--MAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRYFAETAFTLAA------RVI 295
Query: 186 GKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPL-------NVSCERSSPCSVWG 344
GK + GE Y+I+DG+YGS NCIL DH PL + + + +V+G
Sbjct: 296 GKRTRGELRE---YWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHASTVFG 352
Query: 345 PTCDGLDCVVAATRLPAMSLAEWVV 419
PTCD LD VV +LP MS+ +W+V
Sbjct: 353 PTCDSLDTVVTGYQLPEMSVGDWLV 377
>04_01_0200 + 2400929-2402161
Length = 410
Score = 90.2 bits (214), Expect = 6e-19
Identities = 58/141 (41%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Frame = +3
Query: 9 GGFPGSAHSSLREVSQVINTALEVHFPER--SVRVIAEPGRYFAAAAYTLATMIYAKREV 182
GGF A + + + VIN AL +F + +V +I EPGRYFA A+TLA V
Sbjct: 250 GGFVAGA--AFGDAAAVINRALGRYFGDLLPTVELIGEPGRYFAETAFTLAA------RV 301
Query: 183 VGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPLNVSC--ERSSPCSVWGPTCD 356
+GK G+ Y+I+DGVYGS NCIL D PL + E + +V+GPTCD
Sbjct: 302 IGKRRRGDVRE---YWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCD 358
Query: 357 GLDCVVAATRLPAMSLAEWVV 419
+D VV +LP MS+ +W+V
Sbjct: 359 SIDTVVTGYQLPEMSVDDWLV 379
>02_03_0240 - 16739628-16740369,16740392-16740978
Length = 442
Score = 65.7 bits (153), Expect = 1e-11
Identities = 52/166 (31%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Frame = +3
Query: 9 GGFP---GSAHSSLREVSQVINTALEVHFP----ERSVRVIAEPGRYFAAAAYTLATMIY 167
GGF G S+ +E S VI+ AL HF V VIAEPGRYFA A+ LA I+
Sbjct: 255 GGFKAGGGGGESTFQEASAVISAALARHFGGDDMPSGVEVIAEPGRYFAETAFALAARIF 314
Query: 168 AKREVVGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPLNVSCE---------- 317
KR + GE Y+I+DG++G+ C+ +++ P+ + +
Sbjct: 315 GKR------TRGEVR---EYWIDDGMFGTLCCVHFENYVPRPAPVTATADDGDEQAATMG 365
Query: 318 ------------RSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWVV 419
++ P +V+GPT D D VV +LP + +W+V
Sbjct: 366 GEMMITSTNTSTKTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLV 411
>06_03_0405 - 20464701-20466287
Length = 528
Score = 29.9 bits (64), Expect = 0.87
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 153 ATMIYAKREVVGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPLNVS 311
AT++ A+ +++G+D+ GED + I G GSF ++ H +V P V+
Sbjct: 210 ATLVDARGDLLGRDAMGED---LFWAIRGGGGGSFGIVVSWHIKLVPVPPTVT 259
>12_02_0079 +
13310066-13310652,13310737-13310954,13311099-13311347,
13312012-13312076,13312367-13312465
Length = 405
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 281 LMIVENAVEGPVHTIVYEVHRVHLILPLAVLTHHLSFGVYHGG 153
L++V NA E H + + +P+ HH FG Y GG
Sbjct: 73 LLVVANAGEHAFHCVPSNWRTHPIPIPMPRFAHHRYFGSYDGG 115
>05_07_0301 + 29087014-29088349,29088507-29088645,29090350-29091001
Length = 708
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 321 SSPCSVW-GPTCDGLDCVVAATRLPAMSL 404
S+P W G TCD + V A RLP + L
Sbjct: 47 STPACAWVGVTCDAANATVVALRLPGVGL 75
>01_05_0127 -
18401461-18401464,18401868-18403876,18404060-18404237,
18404381-18404958,18405609-18405611
Length = 923
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 64 LITCDTSRRLEWADPGNPPL 5
L+ C R++W DP NPPL
Sbjct: 499 LLGCANLTRVKWIDPSNPPL 518
>08_02_0481 +
17636359-17636593,17638136-17638278,17638431-17638550,
17638916-17639116
Length = 232
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 194 VLTHHLSFGVYHGGEGVCRGGEVPARFSDDAHAALREVHFECRVD 60
+LT S H GE GG+ +DDA ALRE E +D
Sbjct: 66 ILTKRSSSLSTHSGEVALPGGKAEEGDADDAATALREAKEEIGLD 110
>04_03_0236 - 13137616-13137743,13138224-13138311,13139056-13139118
Length = 92
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 267 LYDHQHVVAEPLNVSCERSSPCSVWGPTCDGLDCVVAATRLPAMSLAEWV 416
LY + A L VS S + GP+C G + + +PA+S A WV
Sbjct: 24 LYSKVGLCAAQLYVSASYRSYLVISGPSCQGYELL----SMPALSAAVWV 69
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 349 VGPHTEHGDERSQLTFSGSATT 284
VGPH+EH RS F+GS T
Sbjct: 509 VGPHSEHSYARSLARFAGSLGT 530
>07_01_0798 - 6271261-6271725
Length = 154
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 143 CRGGEVPARFSDDAHAALREVHFECRVDHLRHLTKARVGRSREP 12
C GG+ P + H LREV CR D LR + + V P
Sbjct: 72 CGGGDPPGVRARCCHQ-LREVAARCRCDALRAMVEVLVEEEEAP 114
>10_08_0261 + 16305388-16306104
Length = 238
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 419 HHPLGE*HRRQPGRGHHAVQPVASRAPHRTRRRALT 312
H P+ HRRQP + H V+P R R R T
Sbjct: 200 HRPVLRRHRRQPRQEVHQVRPDGDRHAQDHRERHAT 235
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 27.5 bits (58), Expect = 4.6
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 419 HHPLGE*HRRQPGRGHHA 366
H PL E R +PGRG HA
Sbjct: 27 HRPLAEFRRLRPGRGTHA 44
>01_06_0213 + 27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -1
Query: 176 SFGVYHGGEGVCRGGEVPARFSDDAHAALREVHFECRVDHLRHLTKARVGRSR 18
S G GG G RGG VP S + ++ + R + R T+ R GR R
Sbjct: 1352 SRGGSRGGRGRSRGGRVPRGISISSRIGFKDENEASRKNTRRGRTRGR-GRGR 1403
>12_01_0655 +
5546293-5546478,5546760-5546877,5550697-5550776,
5551329-5552345,5552523-5553344,5553528-5553800
Length = 831
Score = 27.1 bits (57), Expect = 6.1
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = +3
Query: 126 YFAAAAYTLATMIYAKREVVGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPLN 305
Y A A LAT + +V S + E +Y C L D QH + P N
Sbjct: 217 YGAVAVQVLATSCWGVEALVWFRSSCDTERARSDTNEHNIYDG--CCLLDVQHTQSFPGN 274
Query: 306 VSCERSSPCSVWGP----TCDGLDCVVAAT 383
+ + CS GP T G + AAT
Sbjct: 275 GANVIPTKCSTLGPSYATTTSGAKSIPAAT 304
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 84 FPERSVRVIAEPGRYFAAAAYTLATMIYAKREVVG 188
+P +++ PG Y AA A T M+YA R G
Sbjct: 383 YPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPG 417
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 84 FPERSVRVIAEPGRYFAAAAYTLATMIYAKREVVG 188
+P +++ PG Y AA A T M+YA R G
Sbjct: 791 YPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPG 825
>10_08_0260 -
16290798-16290893,16292284-16292570,16293248-16293901,
16294999-16295546,16295900-16295961,16296062-16296481
Length = 688
Score = 27.1 bits (57), Expect = 6.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 361 WTAWWPRPGCRRCHSPSG 414
W WP+ CR C P+G
Sbjct: 52 WNMTWPKCMCRLCQGPNG 69
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 27.1 bits (57), Expect = 6.1
Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = +3
Query: 126 YFAAAAYTLATMIYAKREVVGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPLN 305
Y A A LAT + +V S + E +Y C L D QH + P N
Sbjct: 90 YGAVAVQVLATSCWGVEALVWFRSSCDAERARSDTNERNIYDG--CCLLDVQHTQSFPGN 147
Query: 306 VSCERSSPCSVWGP----TCDGLDCVVAAT 383
+ + CS GP T G + AAT
Sbjct: 148 GANMMPTKCSTLGPSYATTTSGAKSIPAAT 177
>11_01_0224 + 1752626-1752911,1754881-1754963,1755307-1755402
Length = 154
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 355 TGWTAWWPRPGCRRCHSPS 411
TGW WW RPG RR P+
Sbjct: 5 TGWW-WWHRPGGRRGGHPA 22
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,531,125
Number of Sequences: 37544
Number of extensions: 254228
Number of successful extensions: 822
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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