Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C17
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical pr... 124 3e-29
U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine decar... 120 4e-28
U97191-5|AAB52428.1| 477|Caenorhabditis elegans Hypothetical pr... 59 1e-09
AF025457-1|AAB70964.2| 277|Caenorhabditis elegans Hypothetical ... 29 1.0
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 29 1.4
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 29 1.4
U88177-3|AAB42292.1| 191|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 29 1.4
AL023851-1|CAA19554.1| 149|Caenorhabditis elegans Hypothetical ... 28 3.1
AF016445-7|AAC69060.1| 249|Caenorhabditis elegans Pharyngeal gl... 27 4.1
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 7.2
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 7.2
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 26 9.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 26 9.5
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 26 9.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 26 9.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 26 9.5
AF016684-3|AAB66209.2| 157|Caenorhabditis elegans Hypothetical ... 26 9.5
>U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical
protein K11C4.4 protein.
Length = 422
Score = 124 bits (299), Expect = 3e-29
Identities = 60/142 (42%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
Frame = +3
Query: 9 GGFPGSAHSS-LREVSQVINTALEVHFPERSVRVIAEPGRYFAAAAYTLATMIYAKREV- 182
GGFPG+ H + ++++ I AL+ FP+ + R+IAEPGR+FAA ++L I EV
Sbjct: 239 GGFPGAEHHNPFEKIAETIRDALDEFFPDTNKRLIAEPGRFFAAGPFSLVANIIHATEVP 298
Query: 183 ---VGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPL-NVSCERSSPCSVWGPT 350
+ KD + + MY+INDGVYGSFNCIL+DH H + PL + ++WGPT
Sbjct: 299 ASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHAHPIGSPLFDTDRNEKFMSTIWGPT 358
Query: 351 CDGLDCVVAATRLPAMSLAEWV 416
CD LD V +P M++ EW+
Sbjct: 359 CDSLDLVEDKKLMPKMNVGEWL 380
>U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine
decarboxylase protein.
Length = 422
Score = 120 bits (289), Expect = 4e-28
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 6/142 (4%)
Frame = +3
Query: 9 GGFPGSAHSS-LREVSQVINTALEVHFPERSVRVIAEPGRYFAAAAYTLATMIYAKREV- 182
GGFPG+ H + ++++ I AL+ FP+ + R+ EPGR+FAA ++L I EV
Sbjct: 239 GGFPGAEHHNPFEKIAETIRDALDEFFPDTNKRLYREPGRFFAAGPFSLVANIIHATEVP 298
Query: 183 ---VGKDSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPL-NVSCERSSPCSVWGPT 350
+ KD + + MY+INDGVYGSFNCIL+DH H + PL + ++WGPT
Sbjct: 299 ASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHAHPIGSPLFDTDRNEKFMSTIWGPT 358
Query: 351 CDGLDCVVAATRLPAMSLAEWV 416
CD LD V +P M++ EW+
Sbjct: 359 CDSLDLVEDKKLMPKMNVGEWL 380
>U97191-5|AAB52428.1| 477|Caenorhabditis elegans Hypothetical
protein F53F10.2a protein.
Length = 477
Score = 59.3 bits (137), Expect = 1e-09
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Frame = +3
Query: 12 GFPGSAHSSLREVSQVINTALEVHFPERSVRVIAEPGRYFAAAAYTLATMIYAKREVVGK 191
G G+ ++ +N ++ F E ++ A GR+ A+TL T + KR + K
Sbjct: 254 GADGAVNNEFMSFCNSLNNVIDDLF-ESNIDFSASIGRFLVTNAFTLCTNVIGKRAMDAK 312
Query: 192 ---DSEGEDEMHTMYFINDGVYGSFNCILYDHQHVVAEPLNV---SCERSSPCSVWGPTC 353
+ + +D + +Y NDGVYGSF C D + + +PL+V S E+ ++ GPT
Sbjct: 313 FITNDDFDDGVGFVYQTNDGVYGSFGCKQMDIK-PLCKPLDVENDSEEQLHFGTILGPTL 371
Query: 354 DGLDCVVAATRLPAMSLAEWVV 419
DG D + + + EW+V
Sbjct: 372 DGTDVAQRLMKSRQLRVGEWLV 393
>AF025457-1|AAB70964.2| 277|Caenorhabditis elegans Hypothetical
protein C08E3.3 protein.
Length = 277
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/66 (24%), Positives = 29/66 (43%)
Frame = +3
Query: 99 VRVIAEPGRYFAAAAYTLATMIYAKREVVGKDSEGEDEMHTMYFINDGVYGSFNCILYDH 278
V ++ + R+ A + A Y K +G EG T+ I+ + +F +LY H
Sbjct: 151 VVLVVKETRFHVAKLFLAAQSGYFKALPIGNFKEGNSSEVTLSSIDPNDFQNFLEVLYGH 210
Query: 279 QHVVAE 296
Q + +
Sbjct: 211 QEAITD 216
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 221 RVHLILPLAVLTHHLSFGVYHGGEGVCRGGEVP 123
RVHL+L L V+ L HGG V E+P
Sbjct: 816 RVHLLLKLIVVLEKLMNSAIHGGSSVFNLTEIP 848
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 221 RVHLILPLAVLTHHLSFGVYHGGEGVCRGGEVP 123
RVHL+L L V+ L HGG V E+P
Sbjct: 816 RVHLLLKLIVVLEKLMNSAIHGGSSVFNLTEIP 848
>U88177-3|AAB42292.1| 191|Caenorhabditis elegans Hypothetical
protein F53E10.6 protein.
Length = 191
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 120 GRYFAAAAYTLATMIYAKREVVGKDSEGEDEM 215
G+ F + + + + AK+EV G+D +GED+M
Sbjct: 144 GKNFDSDRFADSGYVGAKKEVKGEDDDGEDQM 175
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans
nonsense-mediated mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 221 RVHLILPLAVLTHHLSFGVYHGGEGVCRGGEVP 123
RVHL+L L V+ L HGG V E+P
Sbjct: 816 RVHLLLKLIVVLEKLMNSAIHGGSSVFNLTEIP 848
>AL023851-1|CAA19554.1| 149|Caenorhabditis elegans Hypothetical
protein Y68A4B.1 protein.
Length = 149
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 118 GSAMTRTLRSGKCTSSAVLITCDTSRRLEWAD 23
GS R+ C S + +TC+ LEW D
Sbjct: 58 GSFWVGAKRTAACLESQLTLTCNALNSLEWTD 89
>AF016445-7|AAC69060.1| 249|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 5 protein.
Length = 249
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 231 INDGVYGSFNCILYDHQHVVAEPLNVSCERS---SPCSVWGPTCDGL 362
++ + G NC +Y+ V P V+C+ + + C++ PT D L
Sbjct: 17 VSAAIGGDLNCTVYNGTMFVWTPAAVACQNTISDASCAILYPTTDTL 63
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALREVHFEC--RVDHLRHLTKARVGRSREPAPR 3
G + R SD H A VH R DH H+ A R RE PR
Sbjct: 1740 GFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPR 1786
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALREVHFEC--RVDHLRHLTKARVGRSREPAPR 3
G + R SD H A VH R DH H+ A R RE PR
Sbjct: 1740 GFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPR 1786
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALREVHFEC--RVDHLRHLTKARVGRSREPAPR 3
G + R SD H A VH R DH H+ A R RE PR
Sbjct: 1740 GFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPR 1786
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALREVHFEC--RVDHLRHLTKARVGRSREPAPR 3
G + R SD H A VH R DH H+ A R RE PR
Sbjct: 1740 GFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPR 1786
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALRE 84
GGE+PA+ +D+AH L++
Sbjct: 696 GGEMPAKENDEAHPELKQ 713
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALRE 84
GGE+PA+ +D+AH L++
Sbjct: 697 GGEMPAKENDEAHPELKQ 714
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 299 RFSDDVLMIVENAVEGPVHTIVYE 228
+ DDV V +A+EGPV IV +
Sbjct: 368 KVGDDVKFAVVDAIEGPVEAIVVD 391
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALRE 84
GGE+PA+ +D+AH L++
Sbjct: 697 GGEMPAKENDEAHPELKQ 714
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 137 GGEVPARFSDDAHAALRE 84
GGE+PA+ +D+AH L++
Sbjct: 697 GGEMPAKENDEAHPELKQ 714
>AF016684-3|AAB66209.2| 157|Caenorhabditis elegans Hypothetical
protein F45C12.10a protein.
Length = 157
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/64 (21%), Positives = 29/64 (45%)
Frame = +3
Query: 99 VRVIAEPGRYFAAAAYTLATMIYAKREVVGKDSEGEDEMHTMYFINDGVYGSFNCILYDH 278
V ++ + +++ Y A Y K ++G EG+ T+ I+ + +F +LY H
Sbjct: 78 VVLVVKDVKFYVLKTYLAAQSNYFKALLLGDFEEGKSLEVTLNSIDPNDFQNFLEVLYGH 137
Query: 279 QHVV 290
+
Sbjct: 138 HQAI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,609,582
Number of Sequences: 27780
Number of extensions: 186501
Number of successful extensions: 581
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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