Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C16
(582 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2 pr... 318 9e-87
AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding fact... 318 9e-87
AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein co... 318 9e-87
AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein co... 318 9e-87
AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding prot... 318 9e-87
AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein co... 318 9e-87
BT007054-1|AAP35703.1| 375|Homo sapiens LIM domain binding 1 pr... 305 5e-83
BC009246-1|AAH09246.1| 375|Homo sapiens LIM domain binding 1 pr... 305 5e-83
BC000482-1|AAH00482.1| 375|Homo sapiens LIM domain binding 1 pr... 305 5e-83
AL500527-4|CAH72217.1| 375|Homo sapiens LIM domain binding 1 pr... 305 5e-83
AJ243098-1|CAB45409.1| 402|Homo sapiens Nuclear LIM interactor ... 305 5e-83
AF068652-1|AAC77818.1| 375|Homo sapiens LIM-domain binding fact... 305 5e-83
AF064491-1|AAC28341.1| 375|Homo sapiens LIM homeobox protein co... 305 5e-83
AB250384-1|BAE95402.1| 316|Homo sapiens LIM-domain-binding prot... 305 5e-83
AB016485-1|BAA31991.1| 375|Homo sapiens LIM homeobox protein co... 305 5e-83
AL731702-1|CAI21074.1| 326|Homo sapiens marapsin 2 protein. 32 1.3
AL356323-1|CAH73485.1| 326|Homo sapiens marapsin 2 protein. 32 1.3
BC130400-1|AAI30401.1| 326|Homo sapiens marapsin 2 protein. 32 1.7
X94438-1|CAA64212.2| 427|Homo sapiens transcription factor prot... 31 3.0
U63824-1|AAC50763.1| 434|Homo sapiens transcription factor RTEF... 31 3.0
BC015497-1|AAH15497.2| 434|Homo sapiens TEA domain family membe... 31 3.0
AY101179-1|AAM89497.1| 384|Homo sapiens related transcription e... 31 3.0
AK222947-1|BAD96667.1| 434|Homo sapiens TEA domain family membe... 31 3.0
>BC034019-1|AAH34019.1| 373|Homo sapiens LIM domain binding 2
protein.
Length = 373
Score = 318 bits (781), Expect = 9e-87
Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
FATEFFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN
Sbjct: 54 FATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHN 113
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
+SIT+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR
Sbjct: 114 SSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSI 173
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y L PRDCLKT
Sbjct: 174 LAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKT 233
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 234 CLFQK---WQRMV 243
>AF068651-1|AAC77817.1| 373|Homo sapiens LIM-domain binding factor
CLIM1 protein.
Length = 373
Score = 318 bits (781), Expect = 9e-87
Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
FATEFFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN
Sbjct: 54 FATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHN 113
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
+SIT+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR
Sbjct: 114 SSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSI 173
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y L PRDCLKT
Sbjct: 174 LAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKT 233
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 234 CLFQK---WQRMV 243
>AF064493-1|AAC28343.1| 331|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 331
Score = 318 bits (781), Expect = 9e-87
Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
FATEFFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN
Sbjct: 54 FATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHN 113
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
+SIT+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR
Sbjct: 114 SSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSI 173
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y L PRDCLKT
Sbjct: 174 LAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKT 233
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 234 CLFQK---WQRMV 243
>AF064492-1|AAC28342.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 318 bits (781), Expect = 9e-87
Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
FATEFFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN
Sbjct: 54 FATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHN 113
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
+SIT+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR
Sbjct: 114 SSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSI 173
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y L PRDCLKT
Sbjct: 174 LAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKT 233
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 234 CLFQK---WQRMV 243
>AF052389-1|AAC13274.1| 347|Homo sapiens LIM domain binding protein
protein.
Length = 347
Score = 318 bits (781), Expect = 9e-87
Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
FATEFFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN
Sbjct: 30 FATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHN 89
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
+SIT+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR
Sbjct: 90 SSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSI 149
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y L PRDCLKT
Sbjct: 150 LAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKT 209
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 210 CLFQK---WQRMV 219
>AF047337-1|AAC83552.1| 373|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 373
Score = 318 bits (781), Expect = 9e-87
Identities = 144/193 (74%), Positives = 165/193 (85%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
FATEFFEDDATLTL+FCLEDGPKRYTIGRTLIPRYF +++EGGV++LYY ++ KES+HN
Sbjct: 54 FATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHN 113
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
+SIT+DCD CTMVT HGKP+FTKVCTEGRLILEFTFDDLMRIK+WH +R +REL+PR
Sbjct: 114 SSITVDCDQCTMVTQHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSI 173
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G+TN TLNYLRLCVILEPMQELMSRHK Y L PRDCLKT
Sbjct: 174 LAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKT 233
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 234 CLFQK---WQRMV 243
>BT007054-1|AAP35703.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>BC009246-1|AAH09246.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>BC000482-1|AAH00482.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>AL500527-4|CAH72217.1| 375|Homo sapiens LIM domain binding 1
protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>AJ243098-1|CAB45409.1| 402|Homo sapiens Nuclear LIM interactor
protein.
Length = 402
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 84 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 143
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 144 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 203
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 204 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 263
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 264 CLFQK---WQRMV 273
>AF068652-1|AAC77818.1| 375|Homo sapiens LIM-domain binding factor
CLIM2 protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>AF064491-1|AAC28341.1| 375|Homo sapiens LIM homeobox protein
cofactor protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>AB250384-1|BAE95402.1| 316|Homo sapiens LIM-domain-binding protein
1b protein.
Length = 316
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>AB016485-1|BAA31991.1| 375|Homo sapiens LIM homeobox protein
cofactor (CLIM-2) protein.
Length = 375
Score = 305 bits (750), Expect = 5e-83
Identities = 138/193 (71%), Positives = 161/193 (83%), Gaps = 2/193 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+TFCLEDGPKRYTIGRTLIPRYFRSI+EGG +ELYY ++ PKE+FH+
Sbjct: 57 FTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHS 116
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQ- 366
++LDCD +MVT HGKP+FT+VC EGRL LEF FDD+MRIK+WH ++R HRELIPR
Sbjct: 117 NFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSI 176
Query: 367 -AVHPPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLKT 543
A+H D LDQL+KNITR G++NSTLNYLRLCVILEPMQELMSRHK Y+L PRDCLKT
Sbjct: 177 LAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKT 236
Query: 544 TLFQSGSGWSRLL 582
LFQ W R++
Sbjct: 237 CLFQK---WQRMV 246
>AL731702-1|CAI21074.1| 326|Homo sapiens marapsin 2 protein.
Length = 326
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 415 ITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDC 534
+++QG T+ L ++L +ILEP L+ H +Y +P C
Sbjct: 191 VSKQGETSDELQEMQLPLILEPWCHLLYGHMSYIMPDMLC 230
>AL356323-1|CAH73485.1| 326|Homo sapiens marapsin 2 protein.
Length = 326
Score = 32.3 bits (70), Expect = 1.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 415 ITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDC 534
+++QG T+ L ++L +ILEP L+ H +Y +P C
Sbjct: 191 VSKQGETSDELQEMQLPLILEPWCHLLYGHMSYIMPDMLC 230
>BC130400-1|AAI30401.1| 326|Homo sapiens marapsin 2 protein.
Length = 326
Score = 31.9 bits (69), Expect = 1.7
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 415 ITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDC 534
+++QG T+ L ++L +ILEP L+ H +Y +P C
Sbjct: 191 VSKQGETSDELQEVQLPLILEPWCHLLYGHMSYIMPDMLC 230
>X94438-1|CAA64212.2| 427|Homo sapiens transcription factor
protein.
Length = 427
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 253 TKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQAV-------HPPDHASLDQLTK 411
TKVC+ G+ ++E + R ++ H + R HR + + H P+ ++ + +
Sbjct: 325 TKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLE 384
Query: 412 NIT-RQGITNSTLNYLRLCV 468
N T Q +TN LC+
Sbjct: 385 NFTILQVVTNRDTQETLLCI 404
>U63824-1|AAC50763.1| 434|Homo sapiens transcription factor RTEF-1
protein.
Length = 434
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 253 TKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQAV-------HPPDHASLDQLTK 411
TKVC+ G+ ++E + R ++ H + R HR + + H P+ ++ + +
Sbjct: 332 TKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLE 391
Query: 412 NIT-RQGITNSTLNYLRLCV 468
N T Q +TN LC+
Sbjct: 392 NFTILQVVTNRDTQETLLCI 411
>BC015497-1|AAH15497.2| 434|Homo sapiens TEA domain family member 4
protein.
Length = 434
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 253 TKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQAV-------HPPDHASLDQLTK 411
TKVC+ G+ ++E + R ++ H + R HR + + H P+ ++ + +
Sbjct: 332 TKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLE 391
Query: 412 NIT-RQGITNSTLNYLRLCV 468
N T Q +TN LC+
Sbjct: 392 NFTILQVVTNRDTQETLLCI 411
>AY101179-1|AAM89497.1| 384|Homo sapiens related transcription
enhancer factor 1B protein.
Length = 384
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 253 TKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQAV-------HPPDHASLDQLTK 411
TKVC+ G+ ++E + R ++ H + R HR + + H P+ ++ + +
Sbjct: 282 TKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLE 341
Query: 412 NIT-RQGITNSTLNYLRLCV 468
N T Q +TN LC+
Sbjct: 342 NFTILQVVTNRDTQETLLCI 361
>AK222947-1|BAD96667.1| 434|Homo sapiens TEA domain family member 4
isoform 1 variant protein.
Length = 434
Score = 31.1 bits (67), Expect = 3.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +1
Query: 253 TKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQAV-------HPPDHASLDQLTK 411
TKVC+ G+ ++E + R ++ H + R HR + + H P+ ++ + +
Sbjct: 332 TKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLE 391
Query: 412 NIT-RQGITNSTLNYLRLCV 468
N T Q +TN LC+
Sbjct: 392 NFTILQVVTNRDTQETLLCI 411
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,006,988
Number of Sequences: 237096
Number of extensions: 1708609
Number of successful extensions: 4207
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4192
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -