Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C16
(582 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058561-1|AAL13790.1| 577|Drosophila melanogaster LD25129p pro... 322 2e-88
AF010325-1|AAB62574.1| 577|Drosophila melanogaster CHIP protein. 322 2e-88
AE013599-3781|AAF47142.1| 577|Drosophila melanogaster CG3924-PA... 322 2e-88
AE013599-3780|AAM68293.2| 596|Drosophila melanogaster CG3924-PB... 322 2e-88
AF010328-1|AAB62577.1| 365|Drosophila melanogaster short form o... 109 2e-24
AE013599-1815|AAM68569.1| 466|Drosophila melanogaster CG30482-P... 30 2.0
M32311-1|AAA28529.1| 652|Drosophila melanogaster fasciclin I pr... 29 4.6
M20545-1|AAA28531.1| 652|Drosophila melanogaster protein ( D.me... 29 4.6
AY118531-1|AAM49900.1| 423|Drosophila melanogaster LD25556p pro... 29 4.6
AE014297-2247|AAF55346.2| 649|Drosophila melanogaster CG6588-PA... 29 4.6
AE014297-2246|AAN13715.1| 652|Drosophila melanogaster CG6588-PB... 29 4.6
AE014297-2245|AAN13714.1| 655|Drosophila melanogaster CG6588-PC... 29 4.6
>AY058561-1|AAL13790.1| 577|Drosophila melanogaster LD25129p
protein.
Length = 577
Score = 322 bits (792), Expect = 2e-88
Identities = 147/194 (75%), Positives = 163/194 (84%), Gaps = 3/194 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+ FCLEDGPKRYTIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHN
Sbjct: 242 FTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHN 301
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQA 369
TSITLDCD CT++T HGKP FTKVC + RLILEF +DD MRIKSWHM ++ HRELIPR
Sbjct: 302 TSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSV 361
Query: 370 VH---PPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLK 540
+ PPD LDQ+TKNITR GITNSTLNYLRLCVILEPMQELMSRHKAYAL PRDCLK
Sbjct: 362 IGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLK 421
Query: 541 TTLFQSGSGWSRLL 582
TTLFQ W R++
Sbjct: 422 TTLFQK---WQRMV 432
>AF010325-1|AAB62574.1| 577|Drosophila melanogaster CHIP protein.
Length = 577
Score = 322 bits (792), Expect = 2e-88
Identities = 147/194 (75%), Positives = 163/194 (84%), Gaps = 3/194 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+ FCLEDGPKRYTIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHN
Sbjct: 242 FTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHN 301
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQA 369
TSITLDCD CT++T HGKP FTKVC + RLILEF +DD MRIKSWHM ++ HRELIPR
Sbjct: 302 TSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSV 361
Query: 370 VH---PPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLK 540
+ PPD LDQ+TKNITR GITNSTLNYLRLCVILEPMQELMSRHKAYAL PRDCLK
Sbjct: 362 IGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLK 421
Query: 541 TTLFQSGSGWSRLL 582
TTLFQ W R++
Sbjct: 422 TTLFQK---WQRMV 432
>AE013599-3781|AAF47142.1| 577|Drosophila melanogaster CG3924-PA,
isoform A protein.
Length = 577
Score = 322 bits (792), Expect = 2e-88
Identities = 147/194 (75%), Positives = 163/194 (84%), Gaps = 3/194 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+ FCLEDGPKRYTIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHN
Sbjct: 242 FTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHN 301
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQA 369
TSITLDCD CT++T HGKP FTKVC + RLILEF +DD MRIKSWHM ++ HRELIPR
Sbjct: 302 TSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSV 361
Query: 370 VH---PPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLK 540
+ PPD LDQ+TKNITR GITNSTLNYLRLCVILEPMQELMSRHKAYAL PRDCLK
Sbjct: 362 IGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLK 421
Query: 541 TTLFQSGSGWSRLL 582
TTLFQ W R++
Sbjct: 422 TTLFQK---WQRMV 432
>AE013599-3780|AAM68293.2| 596|Drosophila melanogaster CG3924-PB,
isoform B protein.
Length = 596
Score = 322 bits (792), Expect = 2e-88
Identities = 147/194 (75%), Positives = 163/194 (84%), Gaps = 3/194 (1%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFHN 189
F TEFFEDDA LT+ FCLEDGPKRYTIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFHN
Sbjct: 261 FTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHN 320
Query: 190 TSITLDCDHCTMVTHHGKPIFTKVCTEGRLILEFTFDDLMRIKSWHMAVRAHRELIPRQA 369
TSITLDCD CT++T HGKP FTKVC + RLILEF +DD MRIKSWHM ++ HRELIPR
Sbjct: 321 TSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSV 380
Query: 370 VH---PPDHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALPPRDCLK 540
+ PPD LDQ+TKNITR GITNSTLNYLRLCVILEPMQELMSRHKAYAL PRDCLK
Sbjct: 381 IGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLK 440
Query: 541 TTLFQSGSGWSRLL 582
TTLFQ W R++
Sbjct: 441 TTLFQK---WQRMV 451
>AF010328-1|AAB62577.1| 365|Drosophila melanogaster short form of
CHIP protein.
Length = 365
Score = 109 bits (263), Expect = 2e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 10 FATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIYEGGVSELYYTMRQPKESFH 186
F TEFFEDDA LT+ FCLEDGPKRYTIGRTLIPR+FRSIYEGGVS+LY+ ++ KESFH
Sbjct: 242 FTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFH 300
>AE013599-1815|AAM68569.1| 466|Drosophila melanogaster CG30482-PA
protein.
Length = 466
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 307 MRIKSWHMAVRAHRELIPRQAVHPPDHASLDQLTKNIT--RQGITNSTLNYLR 459
+++ W + AH + P + V PP + QLT +T +Q TN N R
Sbjct: 8 LKVVGWLKRLLAHEKTTPNKMVPPPVTKATSQLTSQVTNNQQPTTNDKRNTQR 60
>M32311-1|AAA28529.1| 652|Drosophila melanogaster fasciclin I
protein.
Length = 652
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 382 DHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKA 510
D + L Q + I NSTL+ LR C I P E R+K+
Sbjct: 29 DDSELSQFYSLLESNQIANSTLS-LRSCTIFVPTNEAFQRYKS 70
>M20545-1|AAA28531.1| 652|Drosophila melanogaster protein (
D.melanogaster fasciclinI mRNA, complete cds. ).
Length = 652
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 382 DHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKA 510
D + L Q + I NSTL+ LR C I P E R+K+
Sbjct: 29 DDSELSQFYSLLESNQIANSTLS-LRSCTIFVPTNEAFQRYKS 70
>AY118531-1|AAM49900.1| 423|Drosophila melanogaster LD25556p
protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 382 DHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKA 510
D + L Q + I NSTL+ LR C I P E R+K+
Sbjct: 29 DDSELSQFYSLLESNQIANSTLS-LRSCTIFVPTNEAFQRYKS 70
>AE014297-2247|AAF55346.2| 649|Drosophila melanogaster CG6588-PA,
isoform A protein.
Length = 649
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 382 DHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKA 510
D + L Q + I NSTL+ LR C I P E R+K+
Sbjct: 29 DDSELSQFYSLLESNQIANSTLS-LRSCTIFVPTNEAFQRYKS 70
>AE014297-2246|AAN13715.1| 652|Drosophila melanogaster CG6588-PB,
isoform B protein.
Length = 652
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 382 DHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKA 510
D + L Q + I NSTL+ LR C I P E R+K+
Sbjct: 29 DDSELSQFYSLLESNQIANSTLS-LRSCTIFVPTNEAFQRYKS 70
>AE014297-2245|AAN13714.1| 655|Drosophila melanogaster CG6588-PC,
isoform C protein.
Length = 655
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 382 DHASLDQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKA 510
D + L Q + I NSTL+ LR C I P E R+K+
Sbjct: 29 DDSELSQFYSLLESNQIANSTLS-LRSCTIFVPTNEAFQRYKS 70
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,752,083
Number of Sequences: 53049
Number of extensions: 530448
Number of successful extensions: 1167
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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