Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C15
(552 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 42 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.1
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 23 2.7
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 4.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 6.3
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 8.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.3
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 42.3 bits (95), Expect = 3e-06
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Frame = +2
Query: 206 GGTCGGSIISPTWILTAGHCTL--FTSGRYVLAG----TNNTNDDSGVMRSVKRLVIHPL 367
G CG +IIS ++LTA HC + T+ ++ G ++ T ++ V+ S+ +++IHP
Sbjct: 185 GMICGATIISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHSINKVIIHPK 244
Query: 368 FSVGPYWLDTDEFDIKQVA 424
+ + ++ D++ I +A
Sbjct: 245 YDI----IEKDDWQINDIA 259
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIPAA--GEQCTVTSCEYP 242
F T+ T+VVV G+C ++P G C + +P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFP 119
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 197 LLFGGTCGGSIISPTWILTA-GHCTLFTSGRYVL 295
+L G TC GS I W+ A +F+ G ++L
Sbjct: 575 VLAGATCLGSSIKAMWLRRALASLMVFSLGLFLL 608
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 229 DRPATGASEKQCVRESLMHCSRVRLLYDCFLFH 131
D+ A E +CV ++CSR L+ + +H
Sbjct: 27 DKHAERQEEYRCVICERVYCSRNSLMTHIYTYH 59
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 381 GPTLNSGWITSRFTERITPLSSFVLLVPANTYR 283
GP ++ RF I PL+ F +P N YR
Sbjct: 133 GPWISIQEQIPRF-RHIGPLTPFPRFIPPNAYR 164
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 381 GPTLNSGWITSRFTERITPLSSFVLLVPANTYR 283
GP ++ RF I PL+ F +P N YR
Sbjct: 374 GPWISIQEQIPRF-RHIGPLTPFPRFIPPNAYR 405
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T+VVV G+C ++P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVP 103
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T+VVV G+C ++P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVP 103
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T+VVV G+C ++P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVP 103
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T+VVV G+C ++P
Sbjct: 83 FDGTYQTSVVVTHDGSCLYVP 103
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T+VVV G+C ++P
Sbjct: 83 FDGTYQTSVVVTHNGSCLYVP 103
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 6.3
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 381 GPTLNSGWITSRFTERITPLSSFVLLVPANTYR 283
GP ++ RF I P +SF +P N YR
Sbjct: 363 GPWISIQEQIPRF-RHIGPSTSFPRFIPPNAYR 394
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 292 HIPAAGEQCTVTSCEYPGWTN 230
H ++GE+ T T P WT+
Sbjct: 17 HTVSSGERDTRTEYYLPNWTD 37
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T VVV G+C ++P
Sbjct: 151 FDGTYQTNVVVTHNGSCLYVP 171
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 8.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 346 FH*THNTTVVVCIVGAC*HIP 284
F T+ T VVV G+C ++P
Sbjct: 151 FDGTYQTNVVVTHNGSCLYVP 171
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,617
Number of Sequences: 438
Number of extensions: 3075
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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