Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_C11
         (310 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094826-1|AAM11179.1| 1266|Drosophila melanogaster LD39940p pro...    27   6.2  
AY051631-1|AAK93055.1|  506|Drosophila melanogaster GH28016p pro...    27   6.2  
AJ133103-1|CAB63452.1|  897|Drosophila melanogaster RFX transcri...    27   6.2  
AE014297-1144|AAF54526.2|  897|Drosophila melanogaster CG6312-PA...    27   6.2  
AE013599-2106|AAF58108.2| 1263|Drosophila melanogaster CG30089-P...    27   6.2  

>AY094826-1|AAM11179.1| 1266|Drosophila melanogaster LD39940p protein.
          Length = 1266

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 76   SVGGGAPLHVLFPLPQDRPIEPS 8
            S GGGAP  +L+P  Q RP  PS
Sbjct: 1040 SRGGGAPHGLLYPEFQHRPPPPS 1062


>AY051631-1|AAK93055.1|  506|Drosophila melanogaster GH28016p
           protein.
          Length = 506

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 76  SVGGGAPLHVLFPLPQDRPIEPS 8
           S GGGAP  +L+P  Q RP  PS
Sbjct: 280 SRGGGAPHGLLYPEFQHRPPPPS 302


>AJ133103-1|CAB63452.1|  897|Drosophila melanogaster RFX
           transcription factor protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 153 LVQR*QTELVPAYSKRNRANQWXPXTSWVVRSSSKEING 269
           +VQR +++   A  +++   QW      VV S+ +E NG
Sbjct: 743 VVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNG 781


>AE014297-1144|AAF54526.2|  897|Drosophila melanogaster CG6312-PA
           protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 153 LVQR*QTELVPAYSKRNRANQWXPXTSWVVRSSSKEING 269
           +VQR +++   A  +++   QW      VV S+ +E NG
Sbjct: 743 VVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNG 781


>AE013599-2106|AAF58108.2| 1263|Drosophila melanogaster CG30089-PA
            protein.
          Length = 1263

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 76   SVGGGAPLHVLFPLPQDRPIEPS 8
            S GGGAP  +L+P  Q RP  PS
Sbjct: 1037 SRGGGAPHGLLYPEFQHRPPPPS 1059


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,806,093
Number of Sequences: 53049
Number of extensions: 157485
Number of successful extensions: 378
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)