Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C10
(506 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 27 0.085
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.60
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.60
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 1.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 4.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 5.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.6
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 9.7
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.7
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 9.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.7
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 27.5 bits (58), Expect = 0.085
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 53 DTFETSISQALVELETNSDLKAQLRE 130
+T T++S AL EL N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.60
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 365 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 496
L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T
Sbjct: 36 LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 76
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.60
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 365 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 496
L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T
Sbjct: 36 LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 76
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +2
Query: 44 IEPDTFETSISQALVELETNSDLKAQLRELYITKAKE 154
+ P+TF ++ V++ N +L L +TK E
Sbjct: 632 VRPNTFTDKVNLTRVDMYANMIETMELTSLLLTKVAE 668
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 4.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 365 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 496
L S Y+ ++ +V + + +++KL SQLI V+L KNQ T
Sbjct: 32 LLSNYNKLVRPVVNVTDAL--TVKIKLKLSQLIDVNL-KNQIMT 72
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 4.2
Identities = 16/78 (20%), Positives = 32/78 (41%)
Frame = +2
Query: 158 ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVAN 337
EL KS + +P+P + + + +KK +G F + + + +
Sbjct: 552 ELKRLKSTVSLLPLPLARTPSVMSASSTCKKDKKNAGSGSRFTIYKANKASKKKREKSSA 611
Query: 338 KQKRPRSRTLTSVYDAIL 391
K++R ++TL V L
Sbjct: 612 KKERKATKTLAIVLGVFL 629
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -3
Query: 261 NFFSNSRTSLIWIFWNAFS 205
+ F+ T +W+FW +F+
Sbjct: 210 DIFAMIGTIFLWLFWPSFN 228
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 132 CTLPRPRKLNFITKNQLS 185
C LPRP+ N +LS
Sbjct: 628 CLLPRPKSENNFASQELS 645
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 132 CTLPRPRKLNFITKNQLS 185
C LPRP+ N +LS
Sbjct: 596 CLLPRPKSENNFASQELS 613
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/21 (28%), Positives = 10/21 (47%)
Frame = -1
Query: 386 WRHIQKSVSWNGAFSVCWLHV 324
WRH + W F V + ++
Sbjct: 401 WRHFAAIIEWLSFFIVIFTYI 421
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 365 VSWNGAFSVCWLHVSC 318
+ WN AF++ +SC
Sbjct: 509 IRWNSAFAIAPAVISC 524
Score = 20.6 bits (41), Expect = 9.7
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -3
Query: 357 ERGLFCLLATRVLWLGLGRILRSPTNTTCLPLNF 256
E + L V +L +L +PT TC+ F
Sbjct: 552 ELTIILLAGVLVCYLNTFLLLATPTTVTCILQRF 585
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.6 bits (41), Expect = 9.7
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -1
Query: 353 GAFSVCWLHVSCGWAWAG 300
G F +CWL W+G
Sbjct: 342 GVFIICWLPFFVVNLWSG 359
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 365 VSWNGAFSVCWLHVSC 318
+ WN AF++ +SC
Sbjct: 599 IRWNSAFAIAPAVISC 614
Score = 20.6 bits (41), Expect = 9.7
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -3
Query: 357 ERGLFCLLATRVLWLGLGRILRSPTNTTCLPLNF 256
E + L V +L +L +PT TC+ F
Sbjct: 642 ELTIILLAGVLVCYLNTFLLLATPTTVTCILQRF 675
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,430
Number of Sequences: 438
Number of extensions: 3268
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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