Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C07
(207 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 31 0.15
AF077542-8|AAC26300.2| 342|Caenorhabditis elegans Serpentine re... 29 0.60
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 28 1.0
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 27 1.8
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 27 2.4
AC024090-3|AAK67220.3| 370|Caenorhabditis elegans Hypothetical ... 27 2.4
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 26 3.2
U46673-5|AAM51533.1| 91|Caenorhabditis elegans Hypothetical pr... 26 4.2
L14429-7|AAK93871.1| 285|Caenorhabditis elegans Coenzyme q (ubi... 26 4.2
Z79603-1|CAB01897.1| 149|Caenorhabditis elegans Hypothetical pr... 25 7.4
U23486-4|AAC46776.2| 261|Caenorhabditis elegans Hypothetical pr... 25 7.4
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 25 7.4
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 25 7.4
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 25 7.4
AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ... 25 7.4
AC199160-1|ABO33281.1| 302|Caenorhabditis elegans Hypothetical ... 25 7.4
AC025715-4|AAP13754.1| 301|Caenorhabditis elegans Hypothetical ... 25 7.4
AC024817-23|AAV34784.1| 430|Caenorhabditis elegans C-type lecti... 25 7.4
AC024817-22|AAK68532.2| 464|Caenorhabditis elegans C-type lecti... 25 7.4
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81117-8|CAB03316.2| 334|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 30.7 bits (66), Expect = 0.15
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +1
Query: 61 VDIDNLEEANN-----VNEKFGNIEQKVNDINKYQVNMINKEKFVTDEESRRSR 207
++I+NLE+ NN NEK IE+ D ++ + M++ ++ EE+ ++R
Sbjct: 260 LNIENLEDLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEEAAKNR 313
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 30.7 bits (66), Expect = 0.15
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +1
Query: 61 VDIDNLEEANN-----VNEKFGNIEQKVNDINKYQVNMINKEKFVTDEESRRSR 207
++I+NLE+ NN NEK IE+ D ++ + M++ ++ EE+ ++R
Sbjct: 260 LNIENLEDLNNEDEDSENEKEEEIEENEEDYDQSDIEMLDSDEEEAGEEAAKNR 313
>AF077542-8|AAC26300.2| 342|Caenorhabditis elegans Serpentine
receptor, class z protein64 protein.
Length = 342
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -2
Query: 173 FSLFIILT*YLF-ISLTFCSILPNFSLTLFA 84
F+LF+++ Y+F IS ++LPN S T+++
Sbjct: 77 FTLFVVVAKYIFFISFQVFAVLPNMSETIYS 107
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
D2085.1 protein.
Length = 2198
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 82 EANNVNEKFGNIEQKVNDINKYQVNMINKEKFVTDEE 192
++N V +KF ++ + +N ++ V I KE+F + +E
Sbjct: 2078 KSNFVQKKFTSLAEGINHVDVVYVTRIQKERFSSPDE 2114
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +1
Query: 10 YYYNTNEYWKVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVNMINKE 171
+ ++ E W D+ + D + + + V +FG ND+ K+ N + E
Sbjct: 394 FRFDMIEEWNQQHDNFIPVFDEINKGSRVEIRFGTFTDYFNDLEKWYSNNKDSE 447
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 13 YYNTNEYWKVIQDSG--LVDIDNLEEANNVNEKFGNIEQKVNDINKYQVNMINKEKFV 180
+ +N+ + I D+ L+ D L + + K N+EQK+ + Y N N KF+
Sbjct: 13 FKTSNDLFNKIDDTANPLLQTD-LINIDQLIIKLSNLEQKIGKVPSYIENRFNLPKFI 69
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 13 YYNTNEYWKVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKY 147
Y++T +W +Q +VD+ + +V ++ IE+ + + KY
Sbjct: 119 YWSTVNWWSGLQVKAVVDVACNLDKTDVGKRNAGIEKIASHLKKY 163
>AC024090-3|AAK67220.3| 370|Caenorhabditis elegans Hypothetical
protein C52E2.6 protein.
Length = 370
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 206 LLLLLSSSVT--NFSLFIILT*YLFISLTFCSILP 108
L +LSS + NF LF +LT L + FC I P
Sbjct: 42 LFRILSSRICEFNFELFSMLTKILIFRMNFCLISP 76
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 145 YQVNMINKEKFVTDEESRR 201
YQ+N ++K KFV D++ RR
Sbjct: 452 YQLNRLSKNKFVGDKKYRR 470
>U46673-5|AAM51533.1| 91|Caenorhabditis elegans Hypothetical
protein C54D1.7 protein.
Length = 91
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +1
Query: 22 TNEYWKVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDIN 141
TN++WK++ L+ L E ++ EK +E+ + +++
Sbjct: 2 TNQFWKIVIVMTLITTMFLGETHSEEEKIVGLEEFLTELD 41
>L14429-7|AAK93871.1| 285|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 5 protein.
Length = 285
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 55 GLVDIDNLEEANNVNEKFGNIEQK---VNDINKYQVNMINKEKFV 180
G D+D E+ V+ F N+ +K +ND V+ + K+ +V
Sbjct: 44 GFTDVDEAEKEQKVHHVFANVAKKYDLMNDAMSMGVHRLWKDYYV 88
>Z79603-1|CAB01897.1| 149|Caenorhabditis elegans Hypothetical
protein M163.1 protein.
Length = 149
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 70 DNLEEANNVNEKFGNIEQKVNDINKYQVNMINKEKFVTDEESR 198
DN + N+VNE+ GN ++ + ++N E+ + + E +
Sbjct: 91 DNQPDENDVNEQIGNNDEAITQQKIAEMNDDLFEQLLAENERK 133
>U23486-4|AAC46776.2| 261|Caenorhabditis elegans Hypothetical
protein F07F6.2 protein.
Length = 261
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 186 ISNEFLFVYHINLIFVYIVNLL 121
IS +F+Y++ L+ +Y NLL
Sbjct: 118 ISTREMFMYYVELLLLYFQNLL 139
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 52 SGLVDIDNLEEANNVNEKFGNIEQ 123
SGL ++ +L+ +N+ EK N+EQ
Sbjct: 183 SGLTNLKSLDLNDNIIEKLENVEQ 206
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/41 (21%), Positives = 21/41 (51%)
Frame = +1
Query: 49 DSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVNMINKE 171
+ L + NL+ +EK+ + Q++ I +Y +N + +
Sbjct: 1410 EKSLPPMSNLQGDEEADEKYMELIQQLKPIERYAINFLETQ 1450
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/41 (21%), Positives = 21/41 (51%)
Frame = +1
Query: 49 DSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVNMINKE 171
+ L + NL+ +EK+ + Q++ I +Y +N + +
Sbjct: 1410 EKSLPPMSNLQGDEEADEKYMELIQQLKPIERYAINFLETQ 1450
>AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical
protein K10E9.1 protein.
Length = 1451
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 151 LDICLYR*P-FVQYYQIFH*HYSLLPNYLCLLNQNLESLSNIHWY 20
L +C+ P V+Y +++ H+S N L+ ++ES+S+ Y
Sbjct: 624 LAVCVATIPNMVRYLKVYQIHFSPKSNAAKFLHLDMESISHCQSY 668
>AC199160-1|ABO33281.1| 302|Caenorhabditis elegans Hypothetical
protein CE7X_3.1 protein.
Length = 302
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 43 IQDSGLVDIDNLEEANN-VNEKFGNIEQKVNDINKYQVNMINKEKFVTDEES 195
+ D ++ + +++E V +K ++E + VN+ KE+F D +S
Sbjct: 3 VDDDEILKVFDIQEQEQIVMKKIRHLENSDLHFERIHVNLAKKERFFDDVQS 54
>AC025715-4|AAP13754.1| 301|Caenorhabditis elegans Hypothetical
protein Y38F2AR.13 protein.
Length = 301
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 43 IQDSGLVDIDNLEEANN-VNEKFGNIEQKVNDINKYQVNMINKEKFVTDEES 195
+ D ++ + +++E V +K ++E + VN+ KE+F D +S
Sbjct: 3 VDDDEILKVFDIQEQEQIVMKKIRHLENSDLHFERIHVNLAKKERFFDDVQS 54
>AC024817-23|AAV34784.1| 430|Caenorhabditis elegans C-type lectin
protein 82, isoform b protein.
Length = 430
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 122 CSILPNFSLTLFASSKLSMSTKPES*IT--FQYS 27
CS PNF T + ++ S +PES +T F YS
Sbjct: 111 CSYNPNFITTEYPTTTDDTSCQPESPVTLLFAYS 144
>AC024817-22|AAK68532.2| 464|Caenorhabditis elegans C-type lectin
protein 82, isoform a protein.
Length = 464
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 122 CSILPNFSLTLFASSKLSMSTKPES*IT--FQYS 27
CS PNF T + ++ S +PES +T F YS
Sbjct: 145 CSYNPNFITTEYPTTTDDTSCQPESPVTLLFAYS 178
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 28 EYWKVIQDSGLVDIDNLEEANNVNEKFGNIEQKVNDINKYQVNMINKEKFVTDEES 195
E +K SG+ D+ L+ +++ FG+ + I K V+ E FV + ES
Sbjct: 579 EEYKKDNSSGMTDLKKLKPLQGLSKPFGDAVGALVSITK--VSRSELETFVRNGES 632
>Z81117-8|CAB03316.2| 334|Caenorhabditis elegans Hypothetical
protein T06E6.7 protein.
Length = 334
Score = 24.6 bits (51), Expect = 9.7
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = -2
Query: 194 LSSSVTNFSLFIILT*Y-LF-ISLTFCS---ILPNFSLTLFASSKLSM-STK 57
LSS + N LF++ T Y LF + L F I FSLT+ M STK
Sbjct: 166 LSSEIKNMKLFVLATDYNLFVVELVFMGAFLIFEMFSLTMLNRWNFKMTSTK 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,132,674
Number of Sequences: 27780
Number of extensions: 68329
Number of successful extensions: 223
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 12,740,198
effective HSP length: 48
effective length of database: 11,406,758
effective search space used: 228135160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -