Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_C07
         (207 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   0.88 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   1.5  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   3.5  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               20   3.5  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    19   6.2  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 0.88
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 100 EKFGNIEQKVNDINKYQVNM 159
           ++ G  +Q ++DIN+ ++NM
Sbjct: 35  KEIGTAQQIIDDINEGKINM 54


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 1.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 73  NLEEANNVNEKFGNI 117
           N+EE+NN+ + F  I
Sbjct: 566 NIEESNNMTDSFTRI 580


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
          protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 64 LLNQNLESLSNIHWY 20
          +LN +L+S SN++ Y
Sbjct: 31 MLNSHLKSHSNVYQY 45


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.8 bits (39), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 189 FISNEFLFVYHINLIFVY 136
           F +  F F+  I LIF+Y
Sbjct: 2   FKNYHFFFILVITLIFLY 19


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 19.0 bits (37), Expect = 6.2
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 13  YYNTNEYWKVIQDSGLVD 66
           YYN N Y K+  +   ++
Sbjct: 317 YYNNNNYKKLYYNINYIE 334


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.310    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,626
Number of Sequences: 438
Number of extensions: 1159
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2912559
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.6 bits)