Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_C05
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 32 0.24
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 32 0.24
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 32 0.24
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical ... 29 3.0
AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical... 28 5.2
AF100656-4|AAF99969.1| 159|Caenorhabditis elegans Hypothetical ... 28 5.2
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 27 6.9
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 6.9
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 6.9
AL132948-30|CAB61063.1| 365|Caenorhabditis elegans Hypothetical... 27 6.9
Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical pr... 27 9.1
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 27 9.1
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 27 9.1
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 273 DSPLTDTSLTAQKMEKWVEA--QRKGEKIDIDVYGKPTEKQLRELEHVRNLSNEP 431
+ P QK ++ EA QR+ E + +VY TE+Q ++LE + + EP
Sbjct: 6580 EKPTDSVQEHQQKDQEQAEAEDQREAEDLGFEVYDADTEEQNQQLEELETVEEEP 6634
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 273 DSPLTDTSLTAQKMEKWVEA--QRKGEKIDIDVYGKPTEKQLRELEHVRNLSNEP 431
+ P QK ++ EA QR+ E + +VY TE+Q ++LE + + EP
Sbjct: 6580 EKPTDSVQEHQQKDQEQAEAEDQREAEDLGFEVYDADTEEQNQQLEELETVEEEP 6634
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 273 DSPLTDTSLTAQKMEKWVEA--QRKGEKIDIDVYGKPTEKQLRELEHVRNLSNEP 431
+ P QK ++ EA QR+ E + +VY TE+Q ++LE + + EP
Sbjct: 455 EKPTDSVQEHQQKDQEQAEAEDQREAEDLGFEVYDADTEEQNQQLEELETVEEEP 509
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical
protein ZC373.4 protein.
Length = 1211
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 213 ETKKVKQ*NTILDKMNHSLEDSPLTDTSLTAQKMEKWVEAQRKGEKI 353
E K VK I K + S++++ + S+ K+EK KGEK+
Sbjct: 578 EEKSVKPEEVIRKKSSASVKETKTVELSVVPVKLEKLASIDEKGEKL 624
>Z46787-3|CAA86741.1| 1032|Caenorhabditis elegans Hypothetical
protein C16C10.3 protein.
Length = 1032
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 324 PTSPSSAPSDWYPSTENPLANDSFCPIWCFTVSPFLFP 211
PTS SAP P + P+ DSF + V +FP
Sbjct: 31 PTSKRSAPMFSTPKSTTPIGRDSFATMDTMNVQMNMFP 68
>AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical
protein T11F8.1 protein.
Length = 261
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = -3
Query: 229 FTFFVS*LTLV*IIXXEVC*LTKXXRXXRRXXNWLKNRFXKXXLGVVTFXXXGITTRAPT 50
F FFVS +T + + R + WL N +G+V F G++ +
Sbjct: 112 FAFFVSNVTTAMFYFAFIWKMQPMCREMKCYDGWLHNSILYSSVGIVPFGVLGMSMYSGN 171
Query: 49 TRRQLKAHTP 20
R LK P
Sbjct: 172 YDRMLKIWLP 181
>AL132949-24|CAB61102.1| 860|Caenorhabditis elegans Hypothetical
protein Y53F4B.28 protein.
Length = 860
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +3
Query: 237 NTILDKMNHSLEDSPLTDTSLTAQKMEKWVEAQRKGEKIDIDVYGKP--TEKQLREL--E 404
NT D N LEDSPLTD S ++M+ +V + ++ VY P ++Q+R E
Sbjct: 492 NTNFDMENLYLEDSPLTDIS---RRMQNFVLGE--AFVVNFGVYPMPDFDDEQIRLKFEE 546
Query: 405 HVRNLSNEPAGG 440
V++L P G
Sbjct: 547 MVKSLETMPKYG 558
>AF100656-4|AAF99969.1| 159|Caenorhabditis elegans Hypothetical
protein F49F1.5 protein.
Length = 159
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 330 LRPTSPSSAPSDWYPSTENPLANDSFCPIWC---FTVSPFLFPN*R 202
++PTSP ++ + P ENP+ CP W F +PF P R
Sbjct: 108 VKPTSPKTSSTASEPCYENPI-----CPHWAANGFCTNPFYSPEHR 148
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Frame = +2
Query: 215 NKKGETVKHHI-------GQNESFARGFSVDGYQSDGAEDGEVGRSPKERGE--DRHRRL 367
N+KG+TV + G+ +AR + D +SD D + R + R E D R
Sbjct: 33 NEKGQTVMQKVKVSRYVAGKAPEYARNYDSDSSESDRETDRDDDRRRRRRRESSDEEDRR 92
Query: 368 RETD*EAIARTRARQKLE 421
R E R R +K E
Sbjct: 93 RHRRHEDYGRRRQVEKPE 110
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 550 FRIVQHRCRRDSFSVILPPSGQNARPSF 467
++ H C +F+VI PPSG+ +P F
Sbjct: 322 YQTALHECTT-AFAVIRPPSGRTIKPGF 348
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 550 FRIVQHRCRRDSFSVILPPSGQNARPSF 467
++ H C +F+VI PPSG+ +P F
Sbjct: 322 YQTALHECTT-AFAVIRPPSGRTIKPGF 348
>AL132948-30|CAB61063.1| 365|Caenorhabditis elegans Hypothetical
protein Y39B6A.39 protein.
Length = 365
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 303 AQKMEKWVEAQRKGEKIDIDVYGKPTEKQLREL 401
AQK+EKW E + + + + ++ G T+ +L +L
Sbjct: 275 AQKVEKWDELKNRTDALKVEFDGSNTKTKLIDL 307
>Z70751-1|CAA94751.1| 544|Caenorhabditis elegans Hypothetical
protein F11A3.1 protein.
Length = 544
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 382 SVGFP*TSMSIFSPFLWASTHFSIFCAVRLVSVNGESS 269
S+GF ++ P +W T F I CA+ +V+G S+
Sbjct: 66 SIGFKKDVAAVVLPNVWHYTSFFIGCAINGGAVSGASA 103
>Z48621-7|CAA88546.1| 770|Caenorhabditis elegans Hypothetical
protein R07B1.9 protein.
Length = 770
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 230 TVKHHIGQNESFARGFSVDGYQSDGAEDGEVGRSPKERGEDRHRRLRET 376
T K G+ GF GY G+ G+ G+SP G+D +R ++ +
Sbjct: 712 TSKRFYGKPYQIESGFY--GYALAGSGSGQPGQSPANVGDDPNRMVQSS 758
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 408 RARVLAIASQSVSRKRLCRSSPLSFGLRPTSPSSAPSDWYPSTENPL 268
R + A+A +S + + L R S G TSPS + P ENP+
Sbjct: 141 RQQPRALAKKSDAGRTLSRDDRGSSGSGETSPSPSQPSISPPNENPM 187
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 408 RARVLAIASQSVSRKRLCRSSPLSFGLRPTSPSSAPSDWYPSTENPL 268
R + A+A +S + + L R S G TSPS + P ENP+
Sbjct: 161 RQQPRALAKKSDAGRTLSRDDRGSSGSGETSPSPSQPSISPPNENPM 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,245,396
Number of Sequences: 27780
Number of extensions: 238170
Number of successful extensions: 903
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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