Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_C05
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.6  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   6.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 472 SFPHKLPV*NCPPAGSLLKFLTCSSSRNCFSVGF 371
           SFP +L +    P G  L+FL   SS N  +V +
Sbjct: 620 SFPARLSLPKGQPQGFPLQFLVVISSSNPLNVPY 653


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 190 LFKPALIRKQKR*NSETPYW 249
           L   AL+RK +  + E PYW
Sbjct: 330 LILTALLRKMQEMSIEVPYW 349


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +3

Query: 483 FWPEGGRITENESRRHRCW 539
           FWP G  I  N+ +    W
Sbjct: 202 FWPTGRGIYHNDDKTFLVW 220


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 67  TTRAPTTRRQLKAHTPTPRAE 5
           TT  P T +   A TP P+ +
Sbjct: 674 TTTTPNTTQNASATTPPPQVD 694


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 74  GNYHQGPNNASP 39
           G+ H G NN SP
Sbjct: 312 GSVHNGSNNGSP 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,302
Number of Sequences: 438
Number of extensions: 2610
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)