Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B24
(382 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 44 1e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.003
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.009
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 31 0.046
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 28 0.43
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 27 0.99
SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyce... 27 0.99
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 1.3
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 27 1.3
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 27 1.3
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 1.7
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 1.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 2.3
SPCC1223.05c |rpl3702|rpl37-2, rpl37|60S ribosomal protein L37|S... 25 4.0
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 25 5.3
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 25 5.3
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 25 5.3
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 24 7.0
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 24 7.0
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 24 9.3
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 43.6 bits (98), Expect = 1e-05
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = +2
Query: 257 DFLAGGISAAVSKTAVAPIERVKI 328
DF+ GG+SAAVSKTA APIERVK+
Sbjct: 30 DFMMGGVSAAVSKTAAAPIERVKL 53
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.5 bits (78), Expect = 0.003
Identities = 14/22 (63%), Positives = 21/22 (95%)
Frame = +2
Query: 263 LAGGISAAVSKTAVAPIERVKI 328
L+GG++A VS+TAV+P+ER+KI
Sbjct: 25 LSGGVAATVSRTAVSPLERMKI 46
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.009
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 260 FLAGGISAAVSKTAVAPIERVKIAAPKSSTSANRSPR 370
F++GGI+ VS+T AP++R+K+ S T + SP+
Sbjct: 131 FISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPK 166
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 31.5 bits (68), Expect = 0.046
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 254 KDFLAGGISAAVSKTAVAPIERVKI 328
K +AGG + V+K+ VAP++RVKI
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKI 43
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 28.3 bits (60), Expect = 0.43
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 193 KEDHIIEQNVESRRSSPRFRQRLSGWRYLRRRLQDSRSAHRARQNCCSQVQHVSKQIAED 372
+ED + ++ +ES S R Q +S RY + S + +Q+C S+ VS QI++D
Sbjct: 180 EEDEVDDEEIESFNSFSRKMQTISNSRY-----RGSPKPNIEKQSCSSESDRVS-QISDD 233
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.1 bits (57), Expect = 0.99
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 248 SAKDFLAGGISAAVSKTAVAPIERVK 325
S KD +AGG + S VAP++ VK
Sbjct: 5 SLKDAIAGGAAGLASSLVVAPLDVVK 30
>SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 0.99
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 360 LFADVLDLGAAILTRSM--GATAVLETAAEIPPARKSLAETRTGSARFDILFDYVVLFGW 187
LF LDLG + G T + A AR+ A+T T +DIL +Y + F W
Sbjct: 95 LFTMYLDLGGVSTGQKQFTGGTDINNDAK----AREVSAQTTTDYIEYDILDEYDIDFKW 150
Query: 186 I 184
+
Sbjct: 151 V 151
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 1.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 203 T*SNKMSNLADPVRVSAKDFLAGGISAAVSKTAVAPIERVK 325
T +N SN P +S F+AGG++ + A AP++ VK
Sbjct: 35 TKANNASNERAPPPLS--HFIAGGVAGMLGAIATAPLDVVK 73
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 1.3
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 42 SNSKKCTHLPLCSCDHEITPNLLIKNRGFVCSWFFHSVCAEVLP 173
S + C LP S T LL N GF SW + + VLP
Sbjct: 120 SLGEMCCFLPNQSSITMYTGRLLNNNIGFAQSWLYFWIWLTVLP 163
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 26.6 bits (56), Expect = 1.3
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 256 FGGNADWIGEIRHFVRLCGPLWVD 185
FGG +W G ++ + +C LW +
Sbjct: 440 FGGGKEWTGFLKERMSVCKDLWAN 463
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 26.2 bits (55), Expect = 1.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 90 EITPNLLIKNRGFVCSWFFH--SVCAEVLPCPQVSTQRGP 203
++T + I N F+CSW + + C +L STQR P
Sbjct: 717 QLTKSTKINNTAFICSWLTNQPAECVNIL----TSTQRYP 752
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 1.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 263 LAGGISAAVSKTAVAPIERVKI 328
LAGGIS+ + + +AP + +KI
Sbjct: 21 LAGGISSVICRFMIAPFDVIKI 42
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 2.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 227 DSTFCSIMWSSLGGYLRTRKDFGTHGMEKPRTNEPPI 117
DS S+ + +G +L+T K F G+E N+ P+
Sbjct: 93 DSAVSSVYVTLIGEFLQTTKSFHEAGIETADLNDFPL 129
>SPCC1223.05c |rpl3702|rpl37-2, rpl37|60S ribosomal protein
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 91
Score = 25.0 bits (52), Expect = 4.0
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 143 FPFRVCRSPSLSASIHPKRTT*SNKMSNLADPVRVSAKDFLAGGISAAVSKTA 301
+P RS + A +RTT + +MS L R F +G +AAV+ +A
Sbjct: 39 YPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRSGKPAAAVAASA 91
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.6 bits (51), Expect = 5.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 247 FRQRLSGWRYLRRRLQDSRSA 309
+RQRL+ W R+ L+D SA
Sbjct: 215 YRQRLNAWCANRKELRDQASA 235
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 24.6 bits (51), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 266 PESLWRKRGLDRRDSTFCSIMWSSLGG-YLRTRKDFGTHGMEKP 138
PE L R+ R T+ S S LGG + ++ +HG P
Sbjct: 118 PEELSRRERAQRLLQTYNSFHGSGLGGLFPNIHRELESHGFSLP 161
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 24.6 bits (51), Expect = 5.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 164 FGTHGMEKPRTNEPPIFNQEIW 99
F M +PR EPP + Q+ W
Sbjct: 485 FFVESMLRPRKLEPPFYLQQCW 506
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 24.2 bits (50), Expect = 7.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 112 LKIGGSFVRGFSIPCVPKSF 171
L++ F++ S+PCVP F
Sbjct: 812 LRVNLDFIKHISMPCVPACF 831
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 24.2 bits (50), Expect = 7.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 57 TFLNSIDHVLSQFCTVASC 1
T+LN V + FCTV +C
Sbjct: 95 TYLNHFYDVFATFCTVKTC 113
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 23.8 bits (49), Expect = 9.3
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 178 RKYPPKEDHIIEQNVESRRSSPRFRQRLSGWRYLRRRLQDSRSAHRARQNCCSQVQHVSK 357
+K +E ++IEQ++ + +QRL R+ R L + + RQ + + K
Sbjct: 81 KKRNVEEQNLIEQSITESQRIFSEKQRLEQERF-NRELLEKKRIEAERQRLKDEEERRKK 139
Query: 358 QIAE 369
++ E
Sbjct: 140 ELME 143
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,686,894
Number of Sequences: 5004
Number of extensions: 34351
Number of successful extensions: 139
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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