Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_B17
         (456 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021222-1|AAX33370.1|  822|Drosophila melanogaster RH55640p pro...    28   6.8  
AY060822-1|AAL28370.1|  641|Drosophila melanogaster GM01081p pro...    28   6.8  
AE014134-2947|AAF53680.2|  822|Drosophila melanogaster CG10333-P...    28   6.8  

>BT021222-1|AAX33370.1|  822|Drosophila melanogaster RH55640p
           protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   GTVPRLGAPPPARVAPSP 57
           GT    GAPPPA VAP P
Sbjct: 193 GTAMASGAPPPAIVAPPP 210


>AY060822-1|AAL28370.1|  641|Drosophila melanogaster GM01081p
          protein.
          Length = 641

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 4  GTVPRLGAPPPARVAPSP 57
          GT    GAPPPA VAP P
Sbjct: 12 GTAMASGAPPPAIVAPPP 29


>AE014134-2947|AAF53680.2|  822|Drosophila melanogaster CG10333-PA
           protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   GTVPRLGAPPPARVAPSP 57
           GT    GAPPPA VAP P
Sbjct: 193 GTAMASGAPPPAIVAPPP 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,566,912
Number of Sequences: 53049
Number of extensions: 314109
Number of successful extensions: 1005
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)