Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B16
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 148 2e-36
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 148 2e-36
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 57 6e-09
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 57 6e-09
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 49 2e-06
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 49 2e-06
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 41 5e-04
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 41 5e-04
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 38 0.005
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 37 0.009
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 31 0.32
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 31 0.32
AL031630-21|CAA20997.2| 736|Caenorhabditis elegans Hypothetical... 30 0.98
AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical... 28 3.9
Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical p... 27 9.1
AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical... 27 9.1
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 148 bits (358), Expect = 2e-36
Identities = 67/124 (54%), Positives = 90/124 (72%)
Frame = +3
Query: 6 RLLLNGVGDINVTALVSYTSFNDESGEPSERLARFKRWLWAIVDKMTHLERQDLVYFWTG 185
RL++ G+ ++++ L T F DES E L RFK+W W +++ T E+Q+LV+FWTG
Sbjct: 2822 RLIICGIESVSISVLQENTGFLDESRASQETLNRFKQWFWQVIESFTQQEKQELVFFWTG 2881
Query: 186 SPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIKTKN 365
SPALPA+ + + SV +RP +D LPTANTCISRLY+P+YSS+ VL+ KLLLAIK KN
Sbjct: 2882 SPALPAAGK-WPTSASVMLRPQEDVFLPTANTCISRLYVPVYSSKRVLRTKLLLAIKAKN 2940
Query: 366 FGFV 377
FGFV
Sbjct: 2941 FGFV 2944
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 148 bits (358), Expect = 2e-36
Identities = 67/124 (54%), Positives = 90/124 (72%)
Frame = +3
Query: 6 RLLLNGVGDINVTALVSYTSFNDESGEPSERLARFKRWLWAIVDKMTHLERQDLVYFWTG 185
RL++ G+ ++++ L T F DES E L RFK+W W +++ T E+Q+LV+FWTG
Sbjct: 2822 RLIICGIESVSISVLQENTGFLDESRASQETLNRFKQWFWQVIESFTQQEKQELVFFWTG 2881
Query: 186 SPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIKTKN 365
SPALPA+ + + SV +RP +D LPTANTCISRLY+P+YSS+ VL+ KLLLAIK KN
Sbjct: 2882 SPALPAAGK-WPTSASVMLRPQEDVFLPTANTCISRLYVPVYSSKRVLRTKLLLAIKAKN 2940
Query: 366 FGFV 377
FGFV
Sbjct: 2941 FGFV 2944
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +3
Query: 108 FKRWLWAIVDKMTHLERQDLVYFWTGSPALPASE-EGFQPMPSVTIRPADDAHLPTANTC 284
++ W ++DK+++ +++ L+ F TG P + QP V + P+ D LPT+ TC
Sbjct: 910 YEEMFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQPRMGVLVIPSSDDELPTSATC 969
Query: 285 ISRLYIPLYSSRHVLKHKLLLAIKT 359
++ L IP YS+R L+ KL AI +
Sbjct: 970 MNMLRIPKYSNRTKLEEKLRYAINS 994
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical protein
F45H7.6 protein.
Length = 889
Score = 57.2 bits (132), Expect = 6e-09
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 117 WLWAIVDKMTHLERQDLVYFWTGSPALP----ASEEGFQPMPSVTIRPADDA-HLPTANT 281
W W +++ MT+ ER DL+ F TGS ++P ++ G + + I DA P A+T
Sbjct: 797 WFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSALRGNEEISKFCIEKWGDATSFPRAHT 856
Query: 282 CISRLYIPLYSSRHVLKHKLLLAI 353
C +RL +P Y+++ LK KL AI
Sbjct: 857 CFNRLQLPSYNTKQQLKSKLQQAI 880
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical protein
F45H7.6 protein.
Length = 889
Score = 57.2 bits (132), Expect = 6e-09
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Frame = +3
Query: 117 WLWAIVDKMTHLERQDLVYFWTGSPALP----ASEEGFQPMPSVTIRPADDA-HLPTANT 281
W W +++ MT+ ER DL+ F TGS ++P ++ G + + I DA P A+T
Sbjct: 797 WFWEVIETMTNQERFDLLLFVTGSSSVPFEGFSALRGNEEISKFCIEKWGDATSFPRAHT 856
Query: 282 CISRLYIPLYSSRHVLKHKLLLAI 353
C +RL +P Y+++ LK KL AI
Sbjct: 857 CFNRLQLPSYNTKQQLKSKLQQAI 880
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +3
Query: 129 IVDKMTHLERQDLVYFWTGSPALPASE-EGFQPMPSVTIR-PADDAHLPTANTCISRLYI 302
+++ +T ER++ + F TG +LP P ++ + + D P+ NTC+ L +
Sbjct: 2677 VMEALTAQERKNFLQFATGCSSLPPGGLANLHPRLTIVRKVESGDGSYPSVNTCVHYLKL 2736
Query: 303 PLYSSRHVLKHKLLLAIKTKNF 368
P YSS +L+ +LL AI K F
Sbjct: 2737 PEYSSSAILRERLLTAINEKGF 2758
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Frame = +3
Query: 9 LLLNGVGDINVTALVSYTSFNDESGEPSERLARFKRWLWAIVDKMTHLERQDLVYFWTGS 188
LL++G+ +++ + + T + ++ + +W W + ++ + F TG+
Sbjct: 4052 LLISGLPTVDIDDMAANTDYKG-----FQKTSTHIQWFWRALRSFEKEDKAKFLQFVTGT 4106
Query: 189 PALP----ASEEGFQPMPSVTIRPADDA--HLPTANTCISRLYIPLYSSRHVLKHKLLLA 350
+P AS EG + +I LP A+TC ++L +P Y S L+ LLLA
Sbjct: 4107 SKVPLQGFASLEGMNGVQKFSIHMDSRGGDRLPAAHTCFNQLDLPQYESYEKLRQSLLLA 4166
Query: 351 IK--TKNFGF 374
I+ T+ FGF
Sbjct: 4167 IRECTEGFGF 4176
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain protein
(e3 ubiquitinligase) protein 1, isoform b protein.
Length = 792
Score = 40.7 bits (91), Expect = 5e-04
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 LLLNGVGDINVTALVSYTSFNDESGEPSERLARFKRWLWAIVDKMTHLERQDLVYFWTGS 188
LLL G+ D++V T + + + + W W V + +R L+ F TG+
Sbjct: 669 LLLCGMQDVDVDDWQRNTVYRHYAPQSKQ-----VTWFWQWVRSLDQEKRARLLQFVTGT 723
Query: 189 PALPASEEGFQPMPSVT-------IRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLL 347
+P GF + T R + LP ++TC +RL +P Y S L KL +
Sbjct: 724 CRVPVG--GFSELMGSTGPQLFCIERVGKENWLPRSHTCFNRLDLPPYRSYDQLVEKLSM 781
Query: 348 AIK-TKNFG 371
AI+ T+ FG
Sbjct: 782 AIEMTEGFG 790
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain protein
(e3 ubiquitinligase) protein 1, isoform a protein.
Length = 794
Score = 40.7 bits (91), Expect = 5e-04
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 LLLNGVGDINVTALVSYTSFNDESGEPSERLARFKRWLWAIVDKMTHLERQDLVYFWTGS 188
LLL G+ D++V T + + + + W W V + +R L+ F TG+
Sbjct: 671 LLLCGMQDVDVDDWQRNTVYRHYAPQSKQ-----VTWFWQWVRSLDQEKRARLLQFVTGT 725
Query: 189 PALPASEEGFQPMPSVT-------IRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLL 347
+P GF + T R + LP ++TC +RL +P Y S L KL +
Sbjct: 726 CRVPVG--GFSELMGSTGPQLFCIERVGKENWLPRSHTCFNRLDLPPYRSYDQLVEKLSM 783
Query: 348 AIK-TKNFG 371
AI+ T+ FG
Sbjct: 784 AIEMTEGFG 792
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 37.5 bits (83), Expect = 0.005
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 123 WAIVDKMTHLERQDLVYFWTGSPALPASEEGFQPMPSVTIRPADDAHLPTANTCISRLYI 302
W +T ER+ + F TGS +P S G++ + + I+P+ LP A+TC + L +
Sbjct: 937 WKAFFALTDDERRKFLQFLTGSTRIPVS--GWEELHAA-IQPSAPESLPVAHTCFNLLDL 993
Query: 303 PLYSSRHVLKHKLLLAIK-TKNF 368
P + L +L ++I+ T+ F
Sbjct: 994 PNIADDVELLRRLRISIEHTEGF 1016
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 36.7 bits (81), Expect = 0.009
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Frame = +3
Query: 9 LLLNGVGDINVTALVSYTSFNDESGEPSERLARFKRWLWAIVDKMTHLERQDLVYFWTGS 188
LL+ G+ I+V + T + G S+ + F W + + R ++ F +G+
Sbjct: 599 LLMCGLQKIDVKDWKANTIYKGGYGPSSQVVHNF----WKCILSFDNEMRARVLQFVSGT 654
Query: 189 PALPASE----EGFQPMPSVTIRPADDAH-LPTANTCISRLYIPLYSSRHVLKHKLLLAI 353
+P + G + TI A LP A+TC +RL +P Y++ LK KLL AI
Sbjct: 655 SRVPMNGFRELYGSNGLQKFTIERWGSADMLPRAHTCFNRLDLPPYTTFKELKSKLLTAI 714
Query: 354 K 356
+
Sbjct: 715 E 715
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 31.5 bits (68), Expect = 0.32
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 264 LPTANTCISRLYIPLYSSRHVLKHKLLLAI 353
LPTA+TC + L +P Y+ + +L KL AI
Sbjct: 1028 LPTASTCFNLLKLPNYNKKSLLLEKLRYAI 1057
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 31.5 bits (68), Expect = 0.32
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 264 LPTANTCISRLYIPLYSSRHVLKHKLLLAI 353
LPTA+TC + L +P Y+ + +L KL AI
Sbjct: 617 LPTASTCFNLLKLPNYNKKSLLLEKLRYAI 646
>AL031630-21|CAA20997.2| 736|Caenorhabditis elegans Hypothetical
protein Y38H6C.20 protein.
Length = 736
Score = 29.9 bits (64), Expect = 0.98
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 163 SCLSRCVILSTMAHNHLLKRASRSEGSPLSSLKLV*DTSAVTFMSPTPF 17
SC S+CV S+MA +++ + EG P + L ++ AV +M P+
Sbjct: 29 SCSSKCVKSSSMALKGRIRQETEEEGGPEAKLAVM----AVVYMDGLPY 73
>AF077542-13|AAC26302.1| 294|Caenorhabditis elegans Hypothetical
protein Y57G7A.10a protein.
Length = 294
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 198 PAS--EEGFQPMPSVTIRPADDAHLPTANTCISRLYIPLYSSRHVLKHKLLLAIKTKNF 368
PAS +E + + V I D A + A CI +L+ S VLK K + T+++
Sbjct: 44 PASLGDEQWAVLEQVCIAALDAARVDLAQDCIDQLHAQFPKSNRVLKLKAMQLESTEHY 102
>Z92825-7|CAB07317.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 388 SVILSLSFFKPSHGRLPLYSIDIDLSNK 471
SVILSL F +P + RL L + + L N+
Sbjct: 445 SVILSLFFLRPRYRRLELENAKLALENE 472
>Z81041-15|CAB02792.1| 487|Caenorhabditis elegans Hypothetical
protein C27A7.6 protein.
Length = 487
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 388 SVILSLSFFKPSHGRLPLYSIDIDLSNK 471
SVILSL F +P + RL L + + L N+
Sbjct: 445 SVILSLFFLRPRYRRLELENAKLALENE 472
>AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical
protein Y39A3CL.1 protein.
Length = 598
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +3
Query: 228 PSVTIRPADDAHLPTANTCISR-----LYIPLYSSRHVLKHK 338
PS TI+ D HL +TC +R Y P Y S H L+ K
Sbjct: 532 PSKTIKLEIDEHLDRCDTCTNRDLNPNCYFPEYLS-HALRQK 572
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,102,944
Number of Sequences: 27780
Number of extensions: 238791
Number of successful extensions: 503
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -