Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_B13
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.9  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    21   9.1  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 338 CFNCTSNVCHDQISLTLHLTSRNSPPREQTN 246
           CFNCT     D   +T  ++ R     ++T+
Sbjct: 609 CFNCTQYQIRDHKDVTQCISCRQGTVPDETH 639


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 259 ESKQIFCYNENLKLSKLNPQ*DRRMYTPPSHNRIVHSLTLLSQ 131
           E  ++FC  EN+KL +L    +   +    HN      TLLS+
Sbjct: 198 EKYKMFCNLENVKLKELRIILEDIKHINTRHNTKNGMKTLLSE 240


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 199 IGDLIWRVLNFHCNK 243
           I +L+  VLN HCN+
Sbjct: 53  IKELLPEVLNNHCNR 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,105
Number of Sequences: 438
Number of extensions: 2975
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)