Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_B12
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29612-5|AAA68800.2|  409|Caenorhabditis elegans Inositol polyph...    31   0.64 
AF411588-1|AAL72637.1|  400|Caenorhabditis elegans inositol poly...    31   0.64 
U29613-3|AAC47062.2|  483|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>U29612-5|AAA68800.2|  409|Caenorhabditis elegans Inositol
           polyphosphate 5-phosphataseprotein 5 protein.
          Length = 409

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 101 SKANFACKSYDVSASMKKPVTVSTSKYPTTKKEEQKKDYGAWGSIYKDKKTFTE 262
           S+ NF  K Y+   S K+ VT     YP   K +  KD+  W SI   +K + +
Sbjct: 108 SQFNFHTKKYEQLTSPKEVVTHGLENYPYVVKHKFPKDF--WPSIKWGRKGYMQ 159


>AF411588-1|AAL72637.1|  400|Caenorhabditis elegans inositol
           polyphosphate 5-phosphatasetype I protein.
          Length = 400

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 101 SKANFACKSYDVSASMKKPVTVSTSKYPTTKKEEQKKDYGAWGSIYKDKKTFTE 262
           S+ NF  K Y+   S K+ VT     YP   K +  KD+  W SI   +K + +
Sbjct: 108 SQFNFHTKKYEQLTSPKEVVTHGLENYPYVVKHKFPKDF--WPSIKWGRKGYMQ 159


>U29613-3|AAC47062.2|  483|Caenorhabditis elegans Hypothetical
           protein K02A6.3a protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 468 YHTSNYTLKSIIAQILFTWRVLNI 397
           YH  ++ LK++I     +WR LN+
Sbjct: 70  YHIDHWRLKNLITNTTSSWRTLNV 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,797,901
Number of Sequences: 27780
Number of extensions: 194384
Number of successful extensions: 569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)