Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B10
(449 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 233 7e-63
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 29 0.44
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 0.58
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 0.58
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 28 0.76
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 2.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 3.1
SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomy... 25 4.1
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 4.1
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 25 4.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 4.1
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.4
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 25 5.4
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 25 5.4
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 25 5.4
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 25 5.4
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 7.1
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 7.1
SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 7.1
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 24 9.4
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 24 9.4
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 24 9.4
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 233 bits (571), Expect = 7e-63
Identities = 104/147 (70%), Positives = 128/147 (87%)
Frame = +3
Query: 9 EQHDQIGKFVEGTVAEGAPIIPISAQLKYNIEVLCEYITKKIPVPLRDFTSPPRMIVIRS 188
E + I KF++GTVAE +PI+PISAQLKYNI+ + EYI KKIP+P+RDFT+ PR+IVIRS
Sbjct: 182 EHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIVKKIPIPVRDFTTAPRLIVIRS 241
Query: 189 FDVNKPGCEVDDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDSDGKLTCRPIFSRIVSL 368
FDVNKPG EVDDL+GGVAGGSIL GVL + EIE+RPG+V+KD DG++ C+PIFSRI+SL
Sbjct: 242 FDVNKPGAEVDDLKGGVAGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISL 301
Query: 369 FAEQNELQYAVPGGLIGVGTKIEPTLC 449
FAE N+L+ AVPGGLIGVGT ++PTLC
Sbjct: 302 FAEHNDLKIAVPGGLIGVGTTVDPTLC 328
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 28.7 bits (61), Expect = 0.44
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 388 SSFCSANSDTIRENIGRQVNLPSESLLTKPGRTSISMPTVSTP*RMEPPATPPLRS 221
S S + +N+ R SLL PG ++ P+VS + +TP LRS
Sbjct: 5 SEHSSIKEEVENDNVHRSHESECGSLLLNPGNVLMAAPSVSEDDQEVSRSTPELRS 60
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 0.58
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = -2
Query: 421 TPIRP--PGTAYWSSFCSANSDTIRENIGRQVNLPSESLLTKPGRTSISMPTVSTP*RME 248
TP+ P P T+ + + N T + S L T TS S+P STP
Sbjct: 407 TPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTST 466
Query: 247 PPATPPLRSSTSQP 206
P T +STS P
Sbjct: 467 PLTTTNCTTSTSIP 480
Score = 27.5 bits (58), Expect = 1.0
Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Frame = -2
Query: 322 SESLLTKPGRTSISMPTVSTP*RMEPPATPPLRSSTSQPGLFT--SNERITIIRGGDVKS 149
S L T TS S+P STP P T +STS P T ++ TI V S
Sbjct: 465 STPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTS 524
Query: 148 LSGTGIFFVIYSQRTSILYLS*ADIGMMGAPSATVPSTNFPIWS 17
T + + TS+LY S A + ST+ P S
Sbjct: 525 ---TPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTS 565
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 28.3 bits (60), Expect = 0.58
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 307 TKPGRTSISMPTVSTP*RMEPPATPPLRSSTSQPGL 200
T+P + T+STP ++PP P R ++Q G+
Sbjct: 903 TEPISAPFATETISTPAPVKPPVPPSRRDRSAQDGV 938
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 27.9 bits (59), Expect = 0.76
Identities = 19/58 (32%), Positives = 22/58 (37%)
Frame = -2
Query: 301 PGRTSISMPTVSTP*RMEPPATPPLRSSTSQPGLFTSNERITIIRGGDVKSLSGTGIF 128
PG T ST T PL S + GLF + T G SGTG+F
Sbjct: 35 PGNTLFGSQNTSTT-GFGQNTTQPLFGSNTNGGLFGNRNNTTTTGGTGFGMSSGTGMF 91
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 2.3
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = -2
Query: 427 VPTPIRPPGTAYWSSFCSANSDTIRENIGRQVNLPSESLL--TKPGRTSISMPTVSTP*R 254
VPT ++ T+Y + SA+S ++ + +L S S L + T+ + PT S+
Sbjct: 52 VPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTS 111
Query: 253 MEPPATPPLRSSTSQPGLFTSNERITIIRGGDVKSLS 143
++ SST+ L +S+ + + + S S
Sbjct: 112 SSATSSSLASSSTTSSSLASSSITSSSLASSSITSSS 148
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.8 bits (54), Expect = 3.1
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = -2
Query: 427 VPTPIRPPGTAYWSSFCSANSDTIRENIGRQVNLPSESLLTKPGRTSISMPT 272
+P P + G + E +G Q+NLP +L K S++ T
Sbjct: 1090 IPNPKKQSGNTSADQVLFNQPKQVTEKLGVQLNLPKTKILEKVSSHSLAQIT 1141
>SPBP4G3.03 |||PI31 proteasome regulator related|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 241
Score = 25.4 bits (53), Expect = 4.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 429 WYRHRSDHRAPRIGAHSVQRTATRYG 352
WY HR +H + HS R A R G
Sbjct: 189 WYPHRPNHFGGKFDGHSRGRGAGRGG 214
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 4.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 232 AESPGAPSFRGCLPSAWRSKYDRA 303
A+SP S R L S+WR K+ R+
Sbjct: 575 ADSPRKTSLRNYLSSSWRLKFMRS 598
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 4.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 63 PIIPISAQLKYNIEVLCEYITKKIPVPLRDFTSPPRMIVIRSF 191
PI+ +S++ N+E + I +KIP P +P R ++I S+
Sbjct: 211 PIL-VSSKTGKNVEQILPEIIQKIPPPKGSENAPLRCLLIDSW 252
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 4.1
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 424 PTPIRPPGTAYWSSFCSANSDTIRE-NIGRQVNLPSESLLTKPGRTSISMPTVSTP*RME 248
P PI PP SS ++ I ++ +N S+ L P + +S ++ +
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPS-SRVSAAALAANKKRP 311
Query: 247 PPATPPLRSSTSQP 206
PP PP R + +P
Sbjct: 312 PPPPPPSRRNRGKP 325
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 215 LAARLVHVKRTYHNHTRRRCEVSKRDGNL 129
LA L ++ TY + R+ C+ S R GN+
Sbjct: 769 LANDLENLTSTYRSSNRQLCDFSNRIGNI 797
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 238 TPPLRSSTSQP-GLFTSNERITIIRGGDVKSLS 143
T P + QP GLF +N+ + + GG VK S
Sbjct: 12 TVPTGKTYIQPVGLFINNQHVDSVHGGRVKVYS 44
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 25.0 bits (52), Expect = 5.4
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -1
Query: 377 FSEQRHDTGEYWTTSQFAVRVLTH*ARSYFDLHADGKH 264
F+ + + G Y+TT ++ + H + D+H D K+
Sbjct: 46 FNAVKKEIGSYYTTKIWSFSLKCHLCSNPIDVHTDPKN 83
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 277 PTVSTP*RMEPPATPPLRSSTSQPGLFTSN 188
P+VS+P + E PAT L+ S P + SN
Sbjct: 345 PSVSSPEKKESPATHLLKVIGSSPYVVHSN 374
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.0 bits (52), Expect = 5.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 358 IRENIGRQVNLPSESL 311
IRE IGR++N+P S+
Sbjct: 195 IREKIGRELNIPERSV 210
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 24.6 bits (51), Expect = 7.1
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 182 YHNHTRRRCEVSKRDGNLFRYIFTENLYIIFELSGYRYDGSSFRDSALHEL 30
Y+N R+ + F Y E+ Y + + Y +DGS+F S L
Sbjct: 360 YYNRGRQPDQRPPNVTAAFNYTSDESQYSLRDSDHYGFDGSAFHYSIYRAL 410
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 24.6 bits (51), Expect = 7.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -2
Query: 220 STSQPGLFTSNERITIIRGGDVKSLSGTGIFFVIYSQRT 104
+++QP L +S + + I GG ++S++ + YS+ T
Sbjct: 73 NSTQPQLVSSEQALLAILGGGLQSITPNSVNQNAYSRST 111
>SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 168
Score = 24.6 bits (51), Expect = 7.1
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -2
Query: 442 VGSILVPTP-IRPPGTAYWSS 383
+ S ++PTP PPG+ YW +
Sbjct: 56 MNSTVLPTPPASPPGSPYWEA 76
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 24.2 bits (50), Expect = 9.4
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -2
Query: 346 IGRQVNLPSESLLTKPGRTSISMPTVSTP*RMEPPATP 233
I N+ SE T P ++ ++ ++ P ++ P+TP
Sbjct: 309 ISNNENMQSEVQTTNPSASTSAVTNITKPTLIQNPSTP 346
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -2
Query: 409 PPGTAYWSSFCSANSDTIRENIGRQVNLPSESLLTKPGRTS 287
PP W S + D + +N+ V + + KP TS
Sbjct: 291 PPPERGWEKLVSDDDDDVNDNVSTSVRDLTAADSNKPSTTS 331
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 13 STTKSESSWRALSRKELPSYLYP 81
+TTKSE++ +LS SYL P
Sbjct: 163 NTTKSEATRSSLSSSSFDSYLRP 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,945,391
Number of Sequences: 5004
Number of extensions: 39813
Number of successful extensions: 169
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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