Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B10
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 27 0.071
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 1.5
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 1.5
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 1.5
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 1.5
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 1.5
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 1.5
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 1.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 1.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 1.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.5
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 22 2.7
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 22 2.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 3.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 3.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 4.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 6.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 8.2
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 27.5 bits (58), Expect = 0.071
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 358 IRENIGRQVNLPSESLLTKPGRTSISMPTVSTP*RMEPPATP 233
++ GR +LP + + +P T+ +M T STP PA+P
Sbjct: 206 VQNGYGR--HLPGHAQMGRPSYTTATMATTSTPGSGSLPASP 245
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 251 HPSGGAYRRHGDRS 292
H G +YR G+RS
Sbjct: 239 HEDGNSYRNDGERS 252
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 314 IIPSHYIEQIPVPVYYGNFPPRPIMVR 340
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IPVP+ PPR I++R
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 309 SLSPVVLRSPCRR*APPE 256
SL+P+VLR C + +P E
Sbjct: 70 SLAPLVLRGACPQCSPEE 87
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 22.2 bits (45), Expect = 2.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 309 SLSPVVLRSPCRR*APPE 256
SL+P+VLR C + +P E
Sbjct: 70 SLAPLVLRGACPQCSPEE 87
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = -2
Query: 427 VPTPIRPPGTAYWSSFCSANSDTIRE 350
+P P + P +W C A S R+
Sbjct: 373 IPEPSKNPAMGHWQMSCVACSPPPRQ 398
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 186 SFDVNKPGCEVDDLRG 233
S D++KPGC+ RG
Sbjct: 6 SRDLSKPGCDEQTSRG 21
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 105 VLCEYITKKIPVPLRDFTSPPRMIVIR 185
++ + ++IP P+ PPR I++R
Sbjct: 329 IIPSHYIEQIPAPVYYGNFPPRPIMVR 355
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 6.2
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = +3
Query: 51 AEGAPIIPISAQLKYNIEVLCEYITKKIPVPLRD-FTSPPRMIVIRSFDVNKPG---CEV 218
A+G P+ P+ K+ E +++ PV L + ++IR V G C V
Sbjct: 236 AQGFPV-PVHRWYKF-----IEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLCIV 289
Query: 219 DDLRGGVAGGSILQGVLTVGMEIEVRPGLVSKDSDGKLTC 338
++ GG + ++L +G EIE + TC
Sbjct: 290 NNSVGGESVETVLTVTAPLGAEIEPSTQTIDFGRPATFTC 329
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 6.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 222 DLRGGVAGGSILQGVL 269
D+R G+ G++L GVL
Sbjct: 364 DMRVGIHTGAVLAGVL 379
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.6 bits (41), Expect = 8.2
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 251 HPSGGAYRRHGDRSTTGLS 307
H GG+ R G+R TG +
Sbjct: 86 HGKGGSRGRGGNRGRTGFN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,119
Number of Sequences: 438
Number of extensions: 3050
Number of successful extensions: 27
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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