Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_B08
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    24   1.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    24   1.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   1.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   5.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 102 NVLKSITPDKDDEDDFKLVYEDDKSQLNTELTHDEPETSKSI 227
           ++L+   P+     D K V E +  + N+E TH +  +S S+
Sbjct: 279 DILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSV 320


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 102 NVLKSITPDKDDEDDFKLVYEDDKSQLNTELTHDEPETSKSI 227
           ++L+   P+     D K V E +  + N+E TH +  +S S+
Sbjct: 194 DILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSV 235


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +3

Query: 102 NVLKSITPDKDDEDDFKLVYEDDKSQLNTELTHDEPETSKSI 227
           ++L+   P+     D K V E +  + N+E TH +  +S S+
Sbjct: 513 DILRPYVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSV 554


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 523 VAKLTPYLQLRHNVHSLRVSWIF 455
           V K+   L LRH    LR  W+F
Sbjct: 213 VMKMCDILHLRHTKIWLRPDWLF 235


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 183 NTELTHDEPETSKSINGNEVNGNHKRRN 266
           N+ +T     T+ S N N  N N+   N
Sbjct: 225 NSTITAGNANTNASNNNNNNNNNNNNNN 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,911
Number of Sequences: 438
Number of extensions: 2324
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)