Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B07
(560 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0091 + 602481-602721,602819-602901,603431-603560,604188-60... 62 3e-10
01_06_1636 - 38800814-38800918,38801024-38801169,38801276-388013... 59 3e-09
04_04_1054 + 30437468-30437763,30438647-30438779,30439099-304391... 56 2e-08
01_07_0361 - 43058132-43058164,43058309-43058374,43058712-430587... 54 8e-08
07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882... 53 2e-07
01_06_1637 - 38805609-38805719,38805872-38806017,38806115-388062... 50 2e-06
10_08_0853 - 21076085-21076138,21076188-21076333,21076540-210766... 47 1e-05
02_05_0434 + 28954230-28954350,28954488-28954570,28954676-289548... 44 6e-05
08_01_0999 + 10145782-10146392,10147665-10147734,10149409-101496... 31 0.83
11_06_0679 - 26227654-26227770,26234067-26236217 30 1.1
09_04_0466 - 17838344-17838631 30 1.5
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 30 1.5
10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441,910... 29 1.9
07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253 29 1.9
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 29 1.9
01_05_0474 - 22552599-22552687,22553494-22553631,22553766-225544... 29 1.9
03_03_0188 + 15269347-15270213 29 2.5
01_06_0952 - 33310262-33310273,33310468-33311142 29 2.5
01_01_0580 + 4305984-4307282,4308610-4308678 29 2.5
11_06_0686 + 26280772-26281611 29 3.4
01_06_1312 - 36205549-36206649,36207558-36207883,36209083-362091... 29 3.4
09_04_0622 + 19030011-19030375,19030748-19030883,19031734-19031844 28 4.4
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 28 4.4
04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379... 28 5.9
07_03_0659 + 20395422-20396765 27 7.7
06_03_1333 - 29410014-29410052,29410071-29410322,29410601-294106... 27 7.7
06_01_0596 + 4297619-4298409,4309499-4309670 27 7.7
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 27 7.7
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 27 7.7
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 7.7
>05_01_0091 +
602481-602721,602819-602901,603431-603560,604188-604267,
604353-604442,605019-605143,605702-605762,605839-605889,
605976-606053,606136-606241,606333-606478,607054-607176
Length = 437
Score = 62.1 bits (144), Expect = 3e-10
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 5/164 (3%)
Frame = +1
Query: 82 CNDGTSAGYYFRRG--TNNQHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSARWPRVRRX 255
C DG++ GY+ +RG T +Q+W+++LEGGG+C + SC R++ L SS
Sbjct: 82 CLDGSAPGYHLQRGSGTGSQNWLLHLEGGGWCRNLRSCAS--RQKSVLGSSQYMECQIEF 139
Query: 256 XXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAG-TRVTPHSGTGFTFTGRFI--XXXXXXX 426
+YN N V + YC ++G + +GT F F G+ I
Sbjct: 140 AGILSNDKFQNPDFYNWNKVKIRYCDGASFSGNVKNELQNGTKFFFRGQRIWEAVMSELL 199
Query: 427 XXXXXXXXXXXXXXSSAGGTGVMLHADEARRALRSKGIRVAAIS 558
SAGG +H D R L K RV ++
Sbjct: 200 LKGLRHAKQAFLTGCSAGGLATFIHCDNF-RTLLPKDSRVKCLA 242
>01_06_1636 -
38800814-38800918,38801024-38801169,38801276-38801381,
38801609-38801686,38801786-38801839,38801920-38801992,
38802059-38802183,38802268-38802357,38802447-38802526,
38802869-38802995,38803145-38803227,38803575-38803710
Length = 400
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 8/173 (4%)
Frame = +1
Query: 16 ASESVAPPDSLKLVWLSNTS---LTCNDGTSAGYYFRRGTNN-QH-WVMYLEGGGYCWDS 180
A + A PD ++L+ L+ C DG+ GY+ +RG + +H W++YLEGG +C
Sbjct: 22 ARSTAAAPDVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGEWCDTI 81
Query: 181 SSCKGRWRRRPALMSSARWPRVRRXXXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAG-TR 357
SC R+ + S++ + +YN N V++ YC ++G
Sbjct: 82 ESCS---NRKTTELGSSKLMEAQEFEGILSNNQTVNSDFYNWNKVVIRYCDGASFSGNAE 138
Query: 358 VTPHSGTGFTFTGRFIXXXXXXXXXXXXXXXXXXXXXS--SAGGTGVMLHADE 510
G+ F G I S SAGG +LH ++
Sbjct: 139 AQDQDGSTLHFRGLRIWQAVLDELMEKGLASAKQALLSGCSAGGLATLLHCND 191
>04_04_1054 +
30437468-30437763,30438647-30438779,30439099-30439159,
30439370-30439483,30439813-30439971,30440124-30440206,
30440423-30440549,30440872-30440951,30441027-30441113,
30441316-30441440,30441543-30441603,30441806-30441859,
30441946-30442023,30442449-30442554,30442655-30442803,
30442945-30443052
Length = 606
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Frame = +1
Query: 67 NTSLTCNDGTSAGYYFRRGTNN--QHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSARWP 240
+T C DG+ Y+F G+ + +W++++EGGG+C ++ C R+ S+++
Sbjct: 251 STGAVCLDGSPPVYHFSPGSGSGANNWLVHMEGGGWCRNAQECS---VRQGNFRGSSKFM 307
Query: 241 RVRRXXXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAGTRVTPHSGTGFTFTGRFIXXXXX 420
R +YN N + + YC + G T + T F G +
Sbjct: 308 RPLSFSGIIGGNQRNNPDFYNWNRIKVRYCDGSSFTGDVETVETSTNLHFRGARVWNAII 367
Query: 421 XXXXXXXXXXXXXXXXS--SAGGTGVMLHADEARRAL 525
S SAGG +LH D+ R L
Sbjct: 368 EDLLAKGMSKAQNALLSGCSAGGLAAILHCDQFRDLL 404
>01_07_0361 -
43058132-43058164,43058309-43058374,43058712-43058794,
43058902-43059014,43059311-43059428,43059935-43060040,
43060128-43060205,43060322-43060372,43060461-43060521,
43060991-43061115,43061671-43061760,43061886-43061965,
43062060-43062489
Length = 477
Score = 54.0 bits (124), Expect = 8e-08
Identities = 41/153 (26%), Positives = 59/153 (38%), Gaps = 5/153 (3%)
Frame = +1
Query: 82 CNDGTSAGYYFRRG--TNNQHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSARWPRVRRX 255
C DGT GY++ G + W+++LEGG +C + +SC R++ +L SSA
Sbjct: 74 CLDGTPPGYHWLPGFGDGSNKWLLHLEGGSWCRNRTSCD--HRKKTSLGSSAYMETRVEF 131
Query: 256 XXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAGTRVTPHS-GTGFTFTGRFI--XXXXXXX 426
+YN N V + YC +G H G F F G+ I
Sbjct: 132 VGILSDDKAQNPDFYNWNKVKIRYCDGASLSGNVQDEHQYGATFFFRGQRIWEAVMAELL 191
Query: 427 XXXXXXXXXXXXXXSSAGGTGVMLHADEARRAL 525
SAGG +H D+ R L
Sbjct: 192 PKGLARAKQAFLTGCSAGGLSTYIHCDDFRALL 224
>07_03_1400 +
26287124-26287298,26287925-26288007,26288141-26288270,
26288369-26288442,26288797-26288883,26288976-26289100,
26289232-26289292,26289606-26289683,26289785-26289890,
26289978-26290123,26290264-26290380
Length = 393
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/147 (25%), Positives = 53/147 (36%), Gaps = 2/147 (1%)
Frame = +1
Query: 82 CNDGTSAGYYFRRGTNN--QHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSARWPRVRRX 255
C DG+ GY+ RG + W++ LEGGG+C D SC +R+ SS +
Sbjct: 60 CLDGSLPGYHLHRGFGSGANSWLVNLEGGGWCNDVKSCV--FRKSSRRGSSNHMESQLQF 117
Query: 256 XXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAGTRVTPHSGTGFTFTGRFIXXXXXXXXXX 435
+YN N V + YC + G +G F +
Sbjct: 118 TGIMSNRPEENPDFYNWNRVKVRYCDGGSFTGDGADASAGLYFRGQRIWQAAMDDLMAQG 177
Query: 436 XXXXXXXXXXXSSAGGTGVMLHADEAR 516
SAGG +LH DE R
Sbjct: 178 MRYANQALLSGCSAGGVSTILHCDEFR 204
>01_06_1637 -
38805609-38805719,38805872-38806017,38806115-38806220,
38806347-38806424,38806682-38806735,38806997-38807075,
38807136-38807260,38807441-38807530,38807635-38807714,
38807837-38807963,38808076-38808158,38808309-38808438
Length = 402
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 5/148 (3%)
Frame = +1
Query: 82 CNDGTSAGYYFRR--GTNNQHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSARWPRVRRX 255
C DG+ GY+ +R G+ W ++L+GG +C C +R+ + S+++ R
Sbjct: 45 CLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCS---KRKMSAYGSSKFMRAVEF 101
Query: 256 XXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAGT-RVTPHSGTGFTFTGRFIXXXXXXXXX 432
+YN N V + YC ++G G+ F G I
Sbjct: 102 NGILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFRGLRIWEAVINELM 161
Query: 433 XXXXXXXXXXXXS--SAGGTGVMLHADE 510
S SAGG +LH ++
Sbjct: 162 GKGLATAKQAILSGCSAGGLAALLHCND 189
>10_08_0853 -
21076085-21076138,21076188-21076333,21076540-21076645,
21076739-21076816,21076923-21076979,21077070-21077130,
21077360-21077412,21077613-21077699,21077820-21077899,
21079469-21079681,21079824-21080064
Length = 391
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Frame = +1
Query: 64 SNTSLTCNDGTSAGYYFRRGTNNQH--WVMYLEGGGYCWDSSSCKGRWRRRPALMSSARW 237
+N C DG+ Y+ RG+ WV+ EGGG+C D+ SC R R S+
Sbjct: 76 ANRWRVCLDGSPPAYHLHRGSGGGAGGWVLQFEGGGWCNDAPSCAERAGTRRG--STRSM 133
Query: 238 PRVRRXXXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAGTRVTPHSGTGFTFTGRFI 405
+ +YN N V L YC +AG + + F G+ I
Sbjct: 134 DSLEVFSGLLSNDPDMNPDFYNWNRVKLRYCDGGSFAGDSELRNGSSVLYFRGQRI 189
>02_05_0434 +
28954230-28954350,28954488-28954570,28954676-28954805,
28955144-28955223,28955329-28955415,28956092-28956145,
28956238-28956315,28956511-28956616,28956717-28956862,
28956991-28957113
Length = 335
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +1
Query: 82 CNDGTSAGYYFRRGTNN--QHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSARWPRVRRX 255
C DG+ Y+ RG + W+++ EGGG+C + ++C R R R L SS + +
Sbjct: 42 CLDGSPPAYHLARGFGSGVNSWLVHFEGGGWCSNVTTCLQRKRTR--LGSSKQMAKQIAF 99
Query: 256 XXXXXXXXXXXXXWYNSNHVLLPYCSSDMWAG 351
+YN N V + YC + G
Sbjct: 100 SGILSNTPDYNPDFYNWNKVKVRYCDGSSFTG 131
>08_01_0999 +
10145782-10146392,10147665-10147734,10149409-10149643,
10149726-10149799,10149881-10149955
Length = 354
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 152 WKAVGTVGTLHLAKAGGDGDLLSCLLQDGRG 244
W G G +H+ GGDG +++ L DG+G
Sbjct: 131 WVTAGEDGRVHVVGGGGDGRVVARRLWDGKG 161
>11_06_0679 - 26227654-26227770,26234067-26236217
Length = 755
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 115 RRGTNNQHWVMYLEGGGYCWDSSSCKGRW 201
RRG NN W + +G G W+S +GRW
Sbjct: 569 RRGRNN--WGQFGKGRGQWWNSGRGRGRW 595
>09_04_0466 - 17838344-17838631
Length = 95
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 130 NQHWVMYLEGGGYCWDSSSCKGRWRRRPALMSSA---RWPRVR 249
+ W+ +G G+ + + +GRWR RP+ SS+ W R R
Sbjct: 4 SSEWIDAEQGHGHWRQALTWRGRWRMRPSTTSSSVGRGWRRTR 46
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 88 DGTSAGYYFRRGTNNQHWVMYLEGGGYCWDSSSCK-GRWRRRPALMSSARW 237
DGT +YF G+ HW+ WDS G W L+S+ARW
Sbjct: 420 DGTDT-HYFHSGSRGHHWM---------WDSRLFNYGNWEVLRFLLSNARW 460
>10_05_0093 -
9108883-9109068,9109156-9109248,9109363-9109441,
9109529-9109639,9109715-9109857,9110050-9110522,
9110568-9111075,9111241-9111810,9111883-9112119,
9112196-9112465
Length = 889
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 479 PALEPTSNNRPVSPKRRRSARTARTMNRPVKV 384
PA + N+P SPKRR+ R+ +N V V
Sbjct: 111 PATTSDTKNKPKSPKRRKGERSINKINNGVYV 142
>07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253
Length = 306
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Frame = -2
Query: 208 AVATGLCKMKSPN---STHRLPSTSP 140
A+A G+ KM+ P +THR+PSTSP
Sbjct: 59 ALAAGVSKMRLPALNAATHRIPSTSP 84
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -1
Query: 491 TPVPPALEPTSNNRPVSPKRRRSAR-TARTMNRPVKV-KPVP 372
TPVPP P PV PK SA+ T+ R +++ KPVP
Sbjct: 811 TPVPPKSPPIEKACPVPPKSPPSAKDTSLPSVRSLQIDKPVP 852
>01_05_0474 -
22552599-22552687,22553494-22553631,22553766-22554447,
22555120-22555167,22555395-22556042,22556960-22557310,
22558622-22558690
Length = 674
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 488 PVPPALEPTSNNRPVSPKRRRSARTARTMNRPVKVKPVPECG 363
P P+L P+S+ + KR + A++ + P K K +CG
Sbjct: 64 PTSPSLLPSSSAKNQKKKREQEAQSFKRRAAPKKAKDTGKCG 105
>03_03_0188 + 15269347-15270213
Length = 288
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 488 PVPPALEPTSNNRPVSPKRRRSARTARTM 402
P PP PTSNN+P + R S R T+
Sbjct: 75 PHPPPPAPTSNNKPPKKRPRASRRPPTTV 103
>01_06_0952 - 33310262-33310273,33310468-33311142
Length = 228
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 196 RWRRRPALMSSARWPRVRR 252
RWRRR A +S++ +PR+RR
Sbjct: 77 RWRRRSAALSTSVFPRLRR 95
>01_01_0580 + 4305984-4307282,4308610-4308678
Length = 455
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 161 PPSKYITQCWLLVPRRK*YPADVPSLQVRDVFESQTSFKLSG 36
PP++ + + W+L P K + D SL V +++ S+ SFK G
Sbjct: 299 PPNEVMLKTWVLSPDFKEWKEDSRSLSVEEMWASE-SFKQMG 339
>11_06_0686 + 26280772-26281611
Length = 279
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 82 CNDGTSAGYYFRRGTNNQHWVMYLEGGGYCWDSSSCK 192
C DG + GY+ +RG + H +G G+ + SSC+
Sbjct: 220 CTDGLAGGYHQQRGGHYCHCAAG-DGHGHYYSPSSCQ 255
>01_06_1312 -
36205549-36206649,36207558-36207883,36209083-36209198,
36210472-36211577
Length = 882
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -3
Query: 210 SPSPPAFAR*RVPTVPTAFQVH 145
SPSPP FA R P TA+ VH
Sbjct: 468 SPSPPPFAAGRDPMFVTAYAVH 489
>09_04_0622 + 19030011-19030375,19030748-19030883,19031734-19031844
Length = 203
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 482 PPALEPTSNNRPVSPKRRRSARTARTMNRPVKVKPVP 372
PPA+ P + +P+ P+R +A + + PV VP
Sbjct: 67 PPAVCPPAPRKPLPPRRLAAAAAGKRKSSPVVFVDVP 103
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 139 WVMYLEGGGYCWDSSSCKGRWRRRPALMSSAR 234
WV W SS G WRRR +M R
Sbjct: 46 WVTDAATSSRAWGSSGVAGSWRRRRRMMEQLR 77
>04_04_0648 -
26936123-26936447,26936540-26936841,26937043-26937915,
26937995-26938108,26938285-26938612,26938719-26938843,
26938926-26938991,26939099-26939166,26939262-26939343,
26939433-26939546,26939647-26939747,26940429-26940678
Length = 915
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 218 RAGRRRHRPLQDEESQQYPPPSKY 147
R +R H+P Q E + Q+ PS+Y
Sbjct: 455 RVAQREHKPQQAENNVQFTTPSRY 478
>07_03_0659 + 20395422-20396765
Length = 447
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 142 VMYLEGGGYCWDSSSCKGRWRRRPALMSSA 231
++Y+ GG +C +S+ C+ R +L S A
Sbjct: 86 ILYIHGGSFCTESAFCRTYHRYAASLASRA 115
>06_03_1333 - 29410014-29410052,29410071-29410322,29410601-29410633,
29411035-29411045,29411420-29415325,29415437-29415920
Length = 1574
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 173 GTLHLAKAGGDGDLLSCLLQDGRGCVALPLYS 268
G L GGDGD L C+L GR P S
Sbjct: 1527 GDKELGVGGGDGDDLDCVLAMGRAPTLSPRIS 1558
>06_01_0596 + 4297619-4298409,4309499-4309670
Length = 320
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 19 SESVAPPDSLKL--VWLSNTSLTCNDG-TSAGYYFRRGTNNQ 135
SE VAP + VWLSN L G T Y++RR +++
Sbjct: 9 SEVVAPAEETPAGAVWLSNLDLAARRGYTPTVYFYRRNGDDE 50
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 261 SGSA-THPRPSCRRHESRSPSPPAFAR*RVPTVPTAFQ 151
SGS T P HE+ P P VP+VP AF+
Sbjct: 688 SGSTITDPLAHALYHEATKPMEPELVSSAVPSVPRAFE 725
>01_06_1729 +
39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 203 DGDLLSCLLQDGRGCVALP 259
D +LLS LL DG C+ LP
Sbjct: 347 DNELLSHLLNDGSSCIILP 365
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 258 GSATHPRPSCRRHESRSPSPPAFAR*R 178
G + P PS RR +SRS SP + R R
Sbjct: 513 GKSRSPSPSARRSKSRSRSPIKYRRSR 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,988,906
Number of Sequences: 37544
Number of extensions: 450537
Number of successful extensions: 1672
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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