Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_B07
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   6.8  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    23   9.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.0  

>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 497 FTQTKRDEPCDQRASASPP 553
           FT T +  P D RA+  PP
Sbjct: 85  FTDTDQGPPSDDRANILPP 103


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 491 TPVPPALEPTSNNRPVSPKRRRSARTARTMNRP 393
           TP    L+   N +   P+R R +   + +NRP
Sbjct: 294 TPWMRPLKMGRNRQKARPRRMRKSSCLKMLNRP 326


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -1

Query: 206  RRHRPLQDEESQQYPPPSKYITQCWLLVPRRK*YPADVPSL-----QVRDVFESQTSFKL 42
            +R R +  +ES+  P  S+Y T     +   K +  D P L     QVRDVF +  +  +
Sbjct: 1603 KRDRIILQDESE--PNTSQYST----FIHEPKHHQEDPPVLKYIKNQVRDVFHAPIASLV 1656

Query: 41   SGGATLS 21
             G A L+
Sbjct: 1657 KGAAVLT 1663


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,332
Number of Sequences: 2352
Number of extensions: 13761
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)