Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B06
(524 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070671-1|AAL48142.1| 148|Drosophila melanogaster RH07540p pro... 278 4e-75
AE013599-3413|AAF46862.1| 148|Drosophila melanogaster CG4046-PA... 278 4e-75
AY089671-1|AAL90409.1| 395|Drosophila melanogaster RH44312p pro... 50 2e-06
AE014297-663|AAF54157.3| 395|Drosophila melanogaster CG2957-PA ... 50 2e-06
AE014296-1922|AAF50084.1| 557|Drosophila melanogaster CG7616-PA... 29 5.1
X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D. m... 28 8.9
X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D. m... 28 8.9
X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D. m... 28 8.9
X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D. m... 28 8.9
X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein. 28 8.9
X06184-1|CAA29549.1| 304|Drosophila melanogaster protein ( Dros... 28 8.9
M17211-1|AAA28417.1| 616|Drosophila melanogaster protein ( D.me... 28 8.9
AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p pro... 28 8.9
AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-P... 28 8.9
AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-P... 28 8.9
AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-P... 28 8.9
AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-P... 28 8.9
AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-P... 28 8.9
AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-P... 28 8.9
AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-P... 28 8.9
>AY070671-1|AAL48142.1| 148|Drosophila melanogaster RH07540p
protein.
Length = 148
Score = 278 bits (681), Expect = 4e-75
Identities = 127/147 (86%), Positives = 142/147 (96%)
Frame = +2
Query: 8 EEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLG 187
++ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLG
Sbjct: 2 QQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLG 61
Query: 188 KEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSL 367
KEKF+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+L
Sbjct: 62 KEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTL 121
Query: 368 LVADPRRCEPKKFGGPGARARYQKSYR 448
LV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 122 LVGDPRRCEPKKFGGPGARARYQKSYR 148
>AE013599-3413|AAF46862.1| 148|Drosophila melanogaster CG4046-PA
protein.
Length = 148
Score = 278 bits (681), Expect = 4e-75
Identities = 127/147 (86%), Positives = 142/147 (96%)
Frame = +2
Query: 8 EEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLG 187
++ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLLG
Sbjct: 2 QQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLG 61
Query: 188 KEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSL 367
KEKF+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+L
Sbjct: 62 KEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRTL 121
Query: 368 LVADPRRCEPKKFGGPGARARYQKSYR 448
LV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 122 LVGDPRRCEPKKFGGPGARARYQKSYR 148
>AY089671-1|AAL90409.1| 395|Drosophila melanogaster RH44312p
protein.
Length = 395
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +2
Query: 56 KKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKG 232
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 233 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 412
GG Q AIR I+ +L +F + + E+ + LL D RR E KKFG
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383
Query: 413 PGARARY 433
GAR +Y
Sbjct: 384 EGARRKY 390
>AE014297-663|AAF54157.3| 395|Drosophila melanogaster CG2957-PA
protein.
Length = 395
Score = 50.0 bits (114), Expect = 2e-06
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = +2
Query: 56 KKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKG 232
+KTA A V G G + +NG+ + E + +L P+ E VD+ V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333
Query: 233 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 412
GG Q AIR I+ +L +F + + E+ + LL D RR E KKFG
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383
Query: 413 PGARARY 433
GAR +Y
Sbjct: 384 EGARRKY 390
>AE014296-1922|AAF50084.1| 557|Drosophila melanogaster CG7616-PA
protein.
Length = 557
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 82 VCYRSCSFLTAENLYGLDWFTSCLLLV 2
+ + C FL+A LY LDW+ + L LV
Sbjct: 507 IYFEYCLFLSAFKLYLLDWYFNILYLV 533
>X07134-1|CAA30146.1| 349|Drosophila melanogaster protein ( D.
melanogaster larvalShaker ShE mRNA for put.
K(+)-channel. ).
Length = 349
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>X07133-1|CAA30145.1| 304|Drosophila melanogaster protein ( D.
melanogaster larvalShaker mRNA for put. K(+)-channel. ).
Length = 304
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257
>X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D.
melanogaster (latepopul.) Shaker ShB mRNA for put.
K(+)-channel.).
Length = 643
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 260 VPDITDPFFLIETLCIIWFTFELTVRFLACP 290
>X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D.
melanogaster adultShaker ShA mRNA for put. K(+)-channel.
).
Length = 616
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein.
Length = 656
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>X06184-1|CAA29549.1| 304|Drosophila melanogaster protein (
Drosophila mRNA forShaker (Sh) protein. ).
Length = 304
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257
>M17211-1|AAA28417.1| 616|Drosophila melanogaster protein (
D.melanogaster potassiumchannel (Shaker) mRNA, complete
cds. ).
Length = 616
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>AY118398-1|AAM48427.1| 571|Drosophila melanogaster RE58855p
protein.
Length = 571
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257
>AE014298-2648|AAS65396.1| 349|Drosophila melanogaster CG12348-PF,
isoform F protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>AE014298-2647|AAN09452.1| 304|Drosophila melanogaster CG12348-PA,
isoform A protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257
>AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-PE,
isoform E protein.
Length = 655
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-PC,
isoform C protein.
Length = 643
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 260 VPDITDPFFLIETLCIIWFTFELTVRFLACP 290
>AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-PG,
isoform G protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-PB,
isoform B protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302
>AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-PD,
isoform D protein.
Length = 571
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 VPDTRNPTVNIISICIVWYRLDLYTLINAIP 515
VPD +P I ++CI+W+ +L A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,090,374
Number of Sequences: 53049
Number of extensions: 595567
Number of successful extensions: 1475
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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