Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B05
(520 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 114 2e-25
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 113 3e-25
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 112 6e-25
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 109 4e-24
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 29 9.8
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 29 9.8
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 29 9.8
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 29 9.8
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 29 9.8
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 114 bits (275), Expect = 2e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP+GGGR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 113 bits (273), Expect = 3e-25
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSG--RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + R+GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDEKDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVR 150
Score = 69.3 bits (162), Expect = 7e-12
Identities = 36/50 (72%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGG-GATNDEEED 494
SF+ R LDS KHIDFSL+SP G GR GRVKRKN +KG GG GA +DEEED
Sbjct: 146 SFIVR-LDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQGGAGAGDDEEED 194
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 112 bits (270), Expect = 6e-25
Identities = 56/70 (80%), Positives = 61/70 (87%)
Frame = +1
Query: 157 RVGVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVFKAGLAKSIHHARILIRQRHIRVRKQ 336
R+GVLDE +MKLDY+LGLKIEDFL + QVFK GLAKSIHHAR+LIRQRHIRVRKQ
Sbjct: 22 RIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVFKLGLAKSIHHARVLIRQRHIRVRKQ 79
Query: 337 VVNIPSFIVR 366
VVNIPSFIVR
Sbjct: 80 VVNIPSFIVR 89
Score = 39.1 bits (87), Expect = 0.009
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGG 419
SF+ R LDS KHIDFSL+SP+GGG
Sbjct: 85 SFIVR-LDSQKHIDFSLRSPYGGG 107
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 109 bits (263), Expect = 4e-24
Identities = 63/95 (66%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Frame = +1
Query: 88 RELLTLEKGS*RCLKACSTTSSGRV--GVLDEKQMKLDYVLGLKIEDFLGDAXFFRXQVF 261
RELLTL++ R L + V GVLDE +MKLDY+LGLKIEDFL + QVF
Sbjct: 58 RELLTLDQKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERR--LQTQVF 115
Query: 262 KAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVR 366
K GLAKSIHHAR+LIRQRH RVRKQVVNIPSFIVR
Sbjct: 116 KLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVR 150
Score = 68.5 bits (160), Expect = 1e-11
Identities = 32/49 (65%), Positives = 37/49 (75%)
Frame = +3
Query: 348 SFVHRPLDSGKHIDFSLKSPFGGGRSGRVKRKNLRKGHGGGATNDEEED 494
SF+ R LDS KHIDFSL SP+GGGR GRVKRKN +KG GG D +E+
Sbjct: 146 SFIVR-LDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQGGAGAGDHKEE 193
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 208 LKIEDFLGDAXFFRXQV----FKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 363
L++ DF+ + F R ++ K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 208 LKIEDFLGDAXFFRXQV----FKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 363
L++ DF+ + F R ++ K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 208 LKIEDFLGDAXFFRXQV----FKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 363
L++ DF+ + F R ++ K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 208 LKIEDFLGDAXFFRXQV----FKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 363
L++ DF+ + F R ++ K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 208 LKIEDFLGDAXFFRXQV----FKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 363
L++ DF+ + F R ++ K +A+ + A + Q H+RV VV P+F+V
Sbjct: 95 LELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,718,613
Number of Sequences: 237096
Number of extensions: 1372002
Number of successful extensions: 11743
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11723
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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