Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B04
(351 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029033-1|ABJ16966.1| 485|Drosophila melanogaster IP02838p pro... 27 8.9
AY672641-1|AAV91002.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AY672640-1|AAV91001.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AY672639-1|AAV91000.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AY049774-1|AAL12210.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AF435469-1|AAL74413.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AF411340-1|AAL05873.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AF382403-1|AAL66188.1| 485|Drosophila melanogaster histamine-ga... 27 8.9
AF188360-1|AAF04108.1| 2210|Drosophila melanogaster filamin A pr... 27 8.9
AF183182-1|AAG43431.1| 2210|Drosophila melanogaster filamin isof... 27 8.9
AF174492-1|AAF25614.1| 2343|Drosophila melanogaster filamin1 pro... 27 8.9
AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF... 27 8.9
AE014297-2697|AAF55691.1| 485|Drosophila melanogaster CG7411-PA... 27 8.9
AE014297-2314|AAF55390.4| 2210|Drosophila melanogaster CG3937-PA... 27 8.9
AE014297-2313|AAS65162.1| 2540|Drosophila melanogaster CG3937-PD... 27 8.9
>BT029033-1|ABJ16966.1| 485|Drosophila melanogaster IP02838p
protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AY672641-1|AAV91002.1| 485|Drosophila melanogaster histamine-gated
chloride channelsubunit protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AY672640-1|AAV91001.1| 485|Drosophila melanogaster histamine-gated
chloride channelsubunit protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AY672639-1|AAV91000.1| 485|Drosophila melanogaster histamine-gated
chloride channelsubunit protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AY049774-1|AAL12210.1| 485|Drosophila melanogaster histamine-gated
chloride channelsubunit A protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AF435469-1|AAL74413.1| 485|Drosophila melanogaster histamine-gated
chloride channelalpha1 subunit protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AF411340-1|AAL05873.1| 485|Drosophila melanogaster histamine-gated
chloride channelsubunit 1 protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AF382403-1|AAL66188.1| 485|Drosophila melanogaster histamine-gated
chloride channelsubunit 2 protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AF188360-1|AAF04108.1| 2210|Drosophila melanogaster filamin A
protein.
Length = 2210
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 293 SKIDGSSYKCHLVQPTEE 240
SK+DG++Y+CH PT+E
Sbjct: 505 SKVDGNTYECH-YYPTKE 521
>AF183182-1|AAG43431.1| 2210|Drosophila melanogaster filamin isoform
A protein.
Length = 2210
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 293 SKIDGSSYKCHLVQPTEE 240
SK+DG++Y+CH PT+E
Sbjct: 505 SKVDGNTYECH-YYPTKE 521
>AF174492-1|AAF25614.1| 2343|Drosophila melanogaster filamin1
protein.
Length = 2343
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 293 SKIDGSSYKCHLVQPTEE 240
SK+DG++Y+CH PT+E
Sbjct: 638 SKVDGNTYECH-YYPTKE 654
>AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF,
isoform F protein.
Length = 1918
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = -2
Query: 134 ILFSITSRRKKSEVPKETTLPIKI 63
++FSI R K+ EV ++++LP+++
Sbjct: 154 LIFSIELRHKRMEVLRKSSLPVRV 177
>AE014297-2697|AAF55691.1| 485|Drosophila melanogaster CG7411-PA
protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 63 NLYRKRSFLRHLRFFTSRCN*K*NYCIWLYKN--VNKMICIVMELGC 197
N++R SF ++ + T + N+ +WLYK+ + M+ + ++L C
Sbjct: 109 NMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSC 155
>AE014297-2314|AAF55390.4| 2210|Drosophila melanogaster CG3937-PA,
isoform A protein.
Length = 2210
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 293 SKIDGSSYKCHLVQPTEE 240
SK+DG++Y+CH PT+E
Sbjct: 505 SKVDGNTYECH-YYPTKE 521
>AE014297-2313|AAS65162.1| 2540|Drosophila melanogaster CG3937-PD,
isoform D protein.
Length = 2540
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2
Query: 293 SKIDGSSYKCHLVQPTEE 240
SK+DG++Y+CH PT+E
Sbjct: 665 SKVDGNTYECH-YYPTKE 681
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,875,051
Number of Sequences: 53049
Number of extensions: 229691
Number of successful extensions: 449
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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