Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B02
(227 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 0.83
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 1.9
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 1.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 1.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 1.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 20 3.4
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 20 3.4
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 4.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 4.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 4.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 4.4
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 20 4.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 19 5.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 19 5.9
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 5.9
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 19 7.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 19 7.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 19 7.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 19 7.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 19 7.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 7.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 19 7.8
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 0.83
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 215 PWVQALFERKR 183
PW+++ FERKR
Sbjct: 262 PWMRSQFERKR 272
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 70 CNNYF*FYTNIN 35
CNNY Y NIN
Sbjct: 101 CNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 70 CNNYF*FYTNIN 35
CNNY Y NIN
Sbjct: 101 CNNYKKLYYNIN 112
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 70 CNNYF*FYTNIN 35
CNNY Y NIN
Sbjct: 101 CNNYRKLYYNIN 112
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 1.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 79 NHDCNNYF*FYTNINSNQSE*HKCL 5
N++ NNY Y N N+N +K L
Sbjct: 328 NYNNNNYNNNYNNYNNNNYNNYKKL 352
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.2 bits (40), Expect = 3.4
Identities = 8/44 (18%), Positives = 17/44 (38%)
Frame = +1
Query: 52 IKNNCYSRGLTLQVVITKYTRR*QTTE*SIINVYCIRQHIFYCY 183
++ C RG+ + +Y Q + + Y +F C+
Sbjct: 766 VQKKCEERGILFMPIPNRYREAKQIYKVGNVQAYIDGNVVFVCH 809
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 20.2 bits (40), Expect = 3.4
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 211 GFRHFSSGNDNSKIC 167
G+ ++S NDN ++C
Sbjct: 78 GYFLYTSKNDNEEVC 92
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 100 NNNYNNYKKLYYNIN 114
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 98 NNNYNNYKKLYYNIN 112
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 19.8 bits (39), Expect = 4.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 79 NHDCNNYF*FYTNIN 35
N++ NNY Y NIN
Sbjct: 108 NNNYNNYKKLYYNIN 122
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 19.8 bits (39), Expect = 4.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +3
Query: 69 QSWFNFAG 92
Q+WF FAG
Sbjct: 67 QAWFGFAG 74
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 19.4 bits (38), Expect = 5.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 19 IPIGYCLYLYKIKNNCYSRGLTLQV 93
IP Y L+LYK K Y LTL++
Sbjct: 138 IPNHY-LWLYKDKTILYMVKLTLKL 161
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 19.4 bits (38), Expect = 5.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 146 LIILYSVVCHRRVYLVITTCKV 81
L I+Y ++ ++ ITTC V
Sbjct: 43 LTIIYMIIFVTGIFGNITTCTV 64
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.4 bits (38), Expect = 5.9
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -2
Query: 202 HFSSGNDNSKIC 167
H+S+G +S++C
Sbjct: 371 HYSNGQTHSQLC 382
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 19.0 bits (37), Expect = 7.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 192 AETITVKYVLPDTIDVNYTLFCSLSPSRVLSN 97
A+ K L +V+ + FC P RVL N
Sbjct: 203 AKAAASKAALAKLRNVHSSSFCIPLPVRVLPN 234
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.0 bits (37), Expect = 7.8
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +3
Query: 111 ATVTDYRIEYN*RLLY 158
AT++D ++EY+ +L +
Sbjct: 71 ATISDIKMEYSVQLTF 86
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 85 KLNHDCNNYF*FYTNINSNQS 23
K H+ NNY Y N N N +
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 85 KLNHDCNNYF*FYTNINSNQS 23
K H+ NNY Y N N N +
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 85 KLNHDCNNYF*FYTNINSNQS 23
K H+ NNY Y N N N +
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNN 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.0 bits (37), Expect = 7.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 79 NHDCNNYF*FYTNINSN 29
N++ NNY + N N+N
Sbjct: 331 NNNYNNYNNYNNNYNNN 347
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 19.0 bits (37), Expect = 7.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 85 KLNHDCNNYF*FYTNINSNQS 23
K H+ NNY Y N N N +
Sbjct: 321 KTIHNNNNYKYNYNNNNYNNN 341
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,645
Number of Sequences: 438
Number of extensions: 1625
Number of successful extensions: 30
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3659655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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