Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B01
(234 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 38 0.002
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 36 0.006
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 36 0.006
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 35 0.008
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 35 0.011
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 34 0.014
08_02_1109 + 24364464-24364710,24366572-24366638,24366639-243667... 28 1.2
03_04_0191 - 18293842-18294273 28 1.2
02_04_0289 + 21615745-21616155,21617417-21617870,21618162-216182... 27 2.1
06_03_1310 + 29238644-29240260 27 2.8
03_05_0092 - 20714102-20717902 27 2.8
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 26 3.7
07_01_0454 + 3443871-3444024,3444268-3444356,3445482-3445557,344... 26 3.7
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 26 3.7
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160... 26 4.9
05_03_0258 - 11153709-11156090 26 4.9
12_01_0800 - 7331444-7331539,7331617-7331742,7331830-7331907,733... 25 6.5
03_05_0314 - 23035295-23036342,23036552-23036616 25 6.5
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 25 6.5
05_01_0553 + 4849535-4849553,4850727-4851913 25 8.6
04_04_0499 + 25674024-25674233,25674515-25675072,25675320-256754... 25 8.6
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 25 8.6
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 144 DKEELVQRAKLAEQAERYDDLAAAMK 221
++E++V+ AKLAEQAERYDD+ MK
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMK 28
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 35.5 bits (78), Expect = 0.006
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +3
Query: 147 KEELVQRAKLAEQAERYDDLAAAMKEV 227
+EE+V AKLAEQAERY+++ M++V
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKV 36
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 35.5 bits (78), Expect = 0.006
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 126 SSTMSVDKEELVQRAKLAEQAERYDDLAAAMKEVTE 233
S+ + +EE V AKLAEQAERY+++ M++V +
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAK 37
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 35.1 bits (77), Expect = 0.008
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 126 SSTMSVDKEELVQRAKLAEQAERYDDLAAAMKEVTE 233
S + +EE V AKLAEQAERY+++ M++V +
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAK 255
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 34.7 bits (76), Expect = 0.011
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 129 STMSVDKEELVQRAKLAEQAERYDDLAAAMKEVTE 233
S +EE V AKLAEQAERY+++ M++V +
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAK 36
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 34.3 bits (75), Expect = 0.014
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 141 VDKEELVQRAKLAEQAERYDDLAAAMKEVTE 233
+ +EE V AKLAEQAERY+++ M++V +
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAK 31
>08_02_1109 +
24364464-24364710,24366572-24366638,24366639-24366746,
24367200-24367332,24368096-24368167,24368754-24368886,
24369310-24369470
Length = 306
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 2 HRCRHCSISFAAREKPKKFCNLLVNYRFTLPTRASVKSISSIVHDVRR 145
H CRH +A E PK F NY+F P +S+S I+ V++
Sbjct: 71 HGCRHIGKEISAGESPKVFGYRERNYQF--PGFFFDRSVSCILRAVQK 116
>03_04_0191 - 18293842-18294273
Length = 143
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 219 SSRPPGHHIVQPAQPTWRVVLVPP 148
++R P HH + P+QP W V+L P
Sbjct: 17 TARAPQHHHI-PSQPRWVVILYSP 39
>02_04_0289 +
21615745-21616155,21617417-21617870,21618162-21618217,
21618307-21618437,21618565-21618727
Length = 404
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 231 PSLPSSRPPGHHIVQPAQPTWRVVLVPP 148
P P HH +Q AQP W V+ PP
Sbjct: 29 PHAHGMHPHAHHHIQ-AQPRWVVIPYPP 55
>06_03_1310 + 29238644-29240260
Length = 538
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 231 PSLPSSRPPGHHIVQPAQPT 172
P P++ PPGHH P P+
Sbjct: 459 PPPPTTTPPGHHAPVPGTPS 478
>03_05_0092 - 20714102-20717902
Length = 1266
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 221 LHRGRQVIISFSLLSQLGALY*FLLIDGHRGRWKILISLMPLLEXXXXX*LANCK 57
LH +++ S+ ++L +L L IDG R + L+ LE + NCK
Sbjct: 1131 LHLENTLLLKLSMFNRLRSLE-ILEIDGSRSFFDDLVEEFEWLEKLQALSIRNCK 1184
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 231 PSLPSSRPPGHHIVQPAQPT 172
PSLP++ PP +V P PT
Sbjct: 33 PSLPTTTPPAPTVVAPPLPT 52
>07_01_0454 +
3443871-3444024,3444268-3444356,3445482-3445557,
3445875-3445880,3445984-3446131,3446237-3446394,
3446473-3446676,3446803-3447038,3447227-3447439,
3447984-3448082,3448262-3448371,3448581-3448655,
3449407-3449485,3449563-3449709,3449785-3449865,
3449975-3450094,3450580-3450702,3451382-3451459,
3451586-3451674,3451760-3451868,3452117-3452227,
3452557-3452612,3452697-3452874,3452971-3453072,
3453160-3453231,3453350-3453415,3453502-3453567,
3453676-3453759,3454638-3454754,3455753-3455827,
3455912-3455995,3456138-3456179
Length = 1148
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 225 LPSSRPPGHHIVQPAQPTWRV----VLVPPYRRTSWTMEDI 115
LP+ P +V P++P V + PP R +WT+E++
Sbjct: 98 LPNGTQPMEAVVVPSEPAATVENQQIEDPPISRFTWTIENL 138
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 26.2 bits (55), Expect = 3.7
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -2
Query: 176 QLGALY*FLLIDG--HRGRWKILISLMPLLEXXXXX*LANCKTFSVFLLRRTIYYSDG 9
Q GA+Y L D + G W ++++ LLE + + TF+ + +I Y DG
Sbjct: 772 QNGAIYAAKLNDKWLYAGGWDKVVNIQELLEDDSEVEIRDVATFTCDSIITSILYWDG 829
>10_01_0132 -
1601421-1601657,1601761-1601922,1602812-1603721,
1604587-1604651,1604704-1604746,1605086-1605128,
1605874-1605955,1606270-1606464,1606567-1606721,
1611207-1611435,1611538-1611693,1612539-1613476,
1614946-1614967
Length = 1078
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +1
Query: 79 PFYPSNKGISEINIFHRPRCPSIRRN---*YNAPSWL 180
PFY + K +S+ ++ H PR P +RRN +P WL
Sbjct: 633 PFYNA-KWLSKCSL-HHPRPPPVRRNASAPLGSPGWL 667
>05_03_0258 - 11153709-11156090
Length = 793
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 231 PSLPSSRPPGHHIVQPAQPTWRVVLVPPYRRTSWTMEDI 115
P+ P RPP H ++ PA P PP R+S ++ +
Sbjct: 16 PAGPKKRPPPHTVLLPATPP------PPPSRSSLPLDSL 48
>12_01_0800 -
7331444-7331539,7331617-7331742,7331830-7331907,
7332515-7332747,7332832-7332871,7333016-7333070,
7333158-7333345,7333416-7333475,7333686-7333769,
7334817-7334903,7335178-7335246,7335354-7335410
Length = 390
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 234 FPSLPSSRPPGHHIVQPAQPTWRVVLVPPY 145
FPS +S P GH + AQP ++PPY
Sbjct: 53 FPSPVASSPQGHPYMWGAQP-----MIPPY 77
>03_05_0314 - 23035295-23036342,23036552-23036616
Length = 370
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 114 QYL-PSSTMSVDKEELVQRAKLAEQAERYDDLAAAM--KEVT 230
QY+ SST S+ KE+L +AK E+ R A + KE+T
Sbjct: 157 QYINQSSTASIKKEDLALKAKEEEEENRKSKSKAEIDDKEMT 198
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -1
Query: 231 PSLPSSRP-PGHHIVQPAQPTWRVVLVPPYRRTSWT 127
P P P P +V P +P W V PP R ++T
Sbjct: 93 PLPPRREPAPPRTVVPPQEPGWSSVPPPPARVINYT 128
>05_01_0553 + 4849535-4849553,4850727-4851913
Length = 401
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 114 QYL-PSSTMSVDKEELVQRAKLAEQAE 191
QY+ SST S+ KE+L +AK E+ E
Sbjct: 60 QYINQSSTASIKKEDLALKAKEEEEEE 86
>04_04_0499 +
25674024-25674233,25674515-25675072,25675320-25675415,
25675509-25675601,25675882-25676125,25676239-25676276,
25676377-25676478
Length = 446
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 166 APSWLSRLNDMMTWRPR 216
AP W +RL+ WRPR
Sbjct: 2 APRWENRLDAKAPWRPR 18
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 231 PSLPSSRPPGHHIVQPAQPTWRVVLVPPYRRTSW 130
PSLP R GH QP PT PP + +W
Sbjct: 295 PSLPGPRRRGHVSHQPLAPT------PPRLQAAW 322
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,489,632
Number of Sequences: 37544
Number of extensions: 113085
Number of successful extensions: 309
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 14,793,348
effective HSP length: 56
effective length of database: 12,690,884
effective search space used: 266508564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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