Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_B01
(234 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 1.1
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 1.9
AJ416109-1|CAC94781.1| 234|Anopheles gambiae PROSAg25 protein p... 23 1.9
AF437890-1|AAL84185.1| 154|Anopheles gambiae odorant binding pr... 22 3.3
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 21 4.4
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 21 4.4
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 21 4.4
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 21 4.4
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 21 5.8
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 21 5.8
AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein p... 21 5.8
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 21 7.7
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 222 PSSRPPGHHIVQPAQPTWRVVLVPPYR 142
P+ +P G +P +P W V +PP+R
Sbjct: 68 PAIQPVGI-FGRPGRPWWSVPGIPPFR 93
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 22.6 bits (46), Expect = 1.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 56 TFSVFLLRRTIYY 18
TF++ + RRT+YY
Sbjct: 237 TFAIIIRRRTLYY 249
>AJ416109-1|CAC94781.1| 234|Anopheles gambiae PROSAg25 protein
protein.
Length = 234
Score = 22.6 bits (46), Expect = 1.9
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +2
Query: 62 NLLVNYRFTLPTRASVKSISSIVHDVRR*GG 154
N + YR +PT V+ +++++ + + GG
Sbjct: 96 NYYLTYREPIPTSQLVQKVATVMQEYTQSGG 126
>AF437890-1|AAL84185.1| 154|Anopheles gambiae odorant binding
protein protein.
Length = 154
Score = 21.8 bits (44), Expect = 3.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 29 FAAREKPKKFCNLLV 73
F AR++ KFC+LLV
Sbjct: 138 FNARDEVIKFCHLLV 152
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 21.4 bits (43), Expect = 4.4
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 2 HRCRHCSISF 31
HRC+HC F
Sbjct: 183 HRCKHCDNCF 192
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 21.4 bits (43), Expect = 4.4
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -2
Query: 56 TFSVFLLRRTIYY 18
TF++ + R+T+YY
Sbjct: 205 TFAILIRRKTLYY 217
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 56 TFSVFLLRRTIYY 18
TF++ + RRT+YY
Sbjct: 222 TFTIQIRRRTLYY 234
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 56 TFSVFLLRRTIYY 18
TF++ + RRT+YY
Sbjct: 222 TFTIQIRRRTLYY 234
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 21.0 bits (42), Expect = 5.8
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -1
Query: 234 FPSLPSSRPP 205
FP+LP+++PP
Sbjct: 573 FPNLPNAQPP 582
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 21.0 bits (42), Expect = 5.8
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 174 TWRVVLVPPYRR 139
TW +V +PP+R+
Sbjct: 735 TWELVELPPHRK 746
>AB090818-1|BAC57911.1| 285|Anopheles gambiae gag-like protein
protein.
Length = 285
Score = 21.0 bits (42), Expect = 5.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 127 RPRCPSIRRN*YNAP 171
RPR PS+R N N P
Sbjct: 126 RPRTPSMRVNCTNIP 140
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 20.6 bits (41), Expect = 7.7
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 150 PYRRTSWTMEDIDFTDALVGR 88
PYR + T I FT+ ++ R
Sbjct: 663 PYRNMATTPVSIRFTNTVIAR 683
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,822
Number of Sequences: 2352
Number of extensions: 3906
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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