Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_B01
         (234 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   1.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   1.1  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   1.5  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   1.5  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   1.5  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   1.5  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   1.5  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   1.5  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   1.5  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   1.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   2.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   2.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   4.6  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              19   6.0  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    19   6.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    19   6.0  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    19   6.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   6.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   6.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    19   8.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   8.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   8.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   8.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   8.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    19   8.0  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 99  GHQ*NQYLPSSTMSVDKEELVQRAKLAEQAERYDDLAAA 215
           GH  N +  S    V KEEL    KL +  E  D L ++
Sbjct: 24  GHDGNLWAKSEGFEVSKEEL---TKLVQGFEEQDILTSS 59


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF V + RRT+YY
Sbjct: 222 TFVVIIRRRTLYY 234


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 185 TFTIQIRRRTLYY 197


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 185 TFTIQIRRRTLYY 197


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 185 TFTIQIRRRTLYY 197


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 185 TFTIQIRRRTLYY 197


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 185 TFTIQIRRRTLYY 197


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 185 TFTIQIRRRTLYY 197


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 253 TFTIQIRRRTLYY 265


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 56  TFSVFLLRRTIYY 18
           TF++ + RRT+YY
Sbjct: 253 TFTIQIRRRTLYY 265


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   HRCRHCSISFAARE 43
           ++C +CS SF+ +E
Sbjct: 120 YQCEYCSKSFSVKE 133


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
 Frame = -1

Query: 231 PSLPSSRPPGHHI-VQPAQPTWRVVLVPPYRR 139
           PSL     PGHH     +Q        PPY R
Sbjct: 54  PSLLRQGVPGHHYGAAGSQQDMPYPRFPPYNR 85


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 57  NFFGFSLAANDIL 19
           N++ FSLA +D+L
Sbjct: 89  NYYLFSLAVSDLL 101


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 58  KLFRFFSCGERYTTVT 11
           K+ + F C  +Y T+T
Sbjct: 115 KISKIFQCFMKYKTIT 130


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 56  TFSVFLLRRTIYYS 15
           TF++ + R+T++Y+
Sbjct: 235 TFNITMRRKTLFYT 248


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 56  TFSVFLLRRTIYYS 15
           TF++ + R+T++Y+
Sbjct: 235 TFNITMRRKTLFYT 248


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 56  TFSVFLLRRTIYYS 15
           TF++ + R+T++Y+
Sbjct: 231 TFNITMRRKTLFYT 244


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -2

Query: 56  TFSVFLLRRTIYYS 15
           TF++ + R+T++Y+
Sbjct: 240 TFNITMRRKTLFYT 253


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 135 SWTMEDID 112
           SWT ED+D
Sbjct: 410 SWTQEDMD 417


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 40  RKTEKVLQFAS*LPFYPSNKGI 105
           ++ ++ LQ A+   F+P+ +GI
Sbjct: 172 KEGDRFLQAANAXRFWPTGRGI 193


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 63  LQNFFGFSLAANDI 22
           +QNFF  SLA  D+
Sbjct: 70  VQNFFIVSLAVADL 83


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 63  LQNFFGFSLAANDI 22
           +QNFF  SLA  D+
Sbjct: 70  VQNFFIVSLAVADL 83


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 174 TWRVVLVPPYRRT 136
           TW ++ VP Y  T
Sbjct: 200 TWDIINVPAYLNT 212



 Score = 19.0 bits (37), Expect = 8.0
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -2

Query: 56  TFSVFLLRRTIYYS 15
           TF + + R+T++Y+
Sbjct: 224 TFYIIIRRKTLFYT 237


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 63  LQNFFGFSLAANDI 22
           +QNFF  SLA  D+
Sbjct: 70  VQNFFIVSLAVADL 83


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 40  RKTEKVLQFAS*LPFYPSNKGI 105
           ++ ++ LQ A+   F+P+ +GI
Sbjct: 188 KEGDRFLQAANACRFWPTGRGI 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,430
Number of Sequences: 438
Number of extensions: 1224
Number of successful extensions: 30
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3772710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)