Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A23
         (386 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY220845-1|AAO49806.1|  516|Homo sapiens cytochrome P450 protein.      30   2.3  
BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosy...    29   6.9  
AB002350-1|BAA20809.2|  721|Homo sapiens KIAA0352 protein.             29   6.9  

>AY220845-1|AAO49806.1|  516|Homo sapiens cytochrome P450 protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 196 RVEPGMSDIIRSHVCPTQLQ 137
           RV PG S I+ +HVCP ++Q
Sbjct: 332 RVSPGCSPIVGTHVCPVRVQ 351


>BC035561-1|AAH35561.1|  493|Homo sapiens hexosaminidase (glycosyl
           hydrolase family 20, catalytic domain) containing
           protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 306 PSCRCSRTPRCWCSP-APSRSGSTRTCS 386
           PSCR  R P  W S   P RSG  +TC+
Sbjct: 363 PSCRSWRLPCSWLSTRMPWRSGWRKTCT 390


>AB002350-1|BAA20809.2|  721|Homo sapiens KIAA0352 protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 140 TIKMHIKNRLGVTSHRCT*HGRVTATVRL 54
           TIK H+K   G   +RCT  G  ++T+ L
Sbjct: 656 TIKCHLKTHSGALMYRCTVCGHYSSTLNL 684


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,015,343
Number of Sequences: 237096
Number of extensions: 720457
Number of successful extensions: 1767
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)