Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_A22
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    26   0.26 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   5.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.7  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 25.8 bits (54), Expect = 0.26
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 339 IFCSRNDVRTSLFVYH 292
           ++CSRN + T ++ YH
Sbjct: 44  VYCSRNSLMTHIYTYH 59


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 449 CRVRHT*RSTDI 414
           CR RH  RSTD+
Sbjct: 522 CRPRHEIRSTDV 533


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 272 NVILYRW*YTNSDVLTSFRLQKISILKM*QIEISRLY 382
           +V +  W +T+ + + S  LQK ++  + Q+E  + Y
Sbjct: 291 DVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECYKYY 327


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 316 HIVSTTENIDIENVANRN 369
           H V+  +N +I+N  N+N
Sbjct: 413 HCVNNNQNDNIQNTNNQN 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,408
Number of Sequences: 438
Number of extensions: 3055
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)